Protein–RNA interactions for Protein: Q8WV19

SFT2D1, Vesicle transport protein SFT2A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1Q8WV19 FAM95B1-212ENST00000592873 4692 ntBASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 PDIA3P1-201ENST00000471856 1510 ntBASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SFT2D1Q8WV19 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AL139094.1-201ENST00000405549 1188 ntBASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 GCOM2-201ENST00000509133 1104 ntBASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AC138761.1-201ENST00000584393 385 ntBASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AL109936.8-201ENST00000641772 604 ntBASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SFT2D1Q8WV19 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 SMCR5-201ENST00000543475 2844 ntBASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SFT2D1Q8WV19 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms