RNA–Protein interactions for RNA: ENST00000552014.5

SLC8B1-213, Transcript of solute carrier family 8 member B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC8B1, Length 3,289 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-213ENST00000552014 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
SLC8B1-213ENST00000552014 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
SLC8B1-213ENST00000552014 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
SLC8B1-213ENST00000552014 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
SLC8B1-213ENST00000552014 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
SLC8B1-213ENST00000552014 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
SLC8B1-213ENST00000552014 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
SLC8B1-213ENST00000552014 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
SLC8B1-213ENST00000552014 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
SLC8B1-213ENST00000552014 HRCP23327 699 aa20.94■□□□□ 0.94
SLC8B1-213ENST00000552014 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
SLC8B1-213ENST00000552014 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.9
SLC8B1-213ENST00000552014 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
SLC8B1-213ENST00000552014 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
SLC8B1-213ENST00000552014 ABCC9O60706 1549 aa20.32■□□□□ 0.84
SLC8B1-213ENST00000552014 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
SLC8B1-213ENST00000552014 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
SLC8B1-213ENST00000552014 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
SLC8B1-213ENST00000552014 NACADO15069 1562 aa20.16■□□□□ 0.82
SLC8B1-213ENST00000552014 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
SLC8B1-213ENST00000552014 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
SLC8B1-213ENST00000552014 MYT1Q01538 1121 aa19.94■□□□□ 0.78
SLC8B1-213ENST00000552014 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
SLC8B1-213ENST00000552014 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
SLC8B1-213ENST00000552014 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
SLC8B1-213ENST00000552014 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
SLC8B1-213ENST00000552014 TTBK1Q5TCY1 1321 aaPredicted RBP19.69■□□□□ 0.74
SLC8B1-213ENST00000552014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
SLC8B1-213ENST00000552014 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
SLC8B1-213ENST00000552014 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
SLC8B1-213ENST00000552014 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
SLC8B1-213ENST00000552014 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
SLC8B1-213ENST00000552014 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
SLC8B1-213ENST00000552014 WIZO95785 1651 aa19.31■□□□□ 0.68
SLC8B1-213ENST00000552014 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
SLC8B1-213ENST00000552014 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
SLC8B1-213ENST00000552014 ACIN1Q9UKV3 1341 aaKnown RBP19.25■□□□□ 0.67
SLC8B1-213ENST00000552014 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
SLC8B1-213ENST00000552014 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
SLC8B1-213ENST00000552014 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
SLC8B1-213ENST00000552014 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
SLC8B1-213ENST00000552014 PRKCSHP14314 528 aaPredicted RBP19.13■□□□□ 0.65
SLC8B1-213ENST00000552014 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
SLC8B1-213ENST00000552014 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
SLC8B1-213ENST00000552014 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
SLC8B1-213ENST00000552014 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
SLC8B1-213ENST00000552014 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
SLC8B1-213ENST00000552014 SOGA1O94964 1423 aa19.06■□□□□ 0.64
SLC8B1-213ENST00000552014 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
SLC8B1-213ENST00000552014 CEP162Q5TB80 1403 aa19.05■□□□□ 0.64
SLC8B1-213ENST00000552014 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
SLC8B1-213ENST00000552014 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
SLC8B1-213ENST00000552014 BCL11AQ9H165 835 aa18.99■□□□□ 0.63
SLC8B1-213ENST00000552014 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
SLC8B1-213ENST00000552014 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
SLC8B1-213ENST00000552014 ZNF316A6NFI3 1004 aaPredicted RBP18.94■□□□□ 0.62
SLC8B1-213ENST00000552014 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
SLC8B1-213ENST00000552014 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
SLC8B1-213ENST00000552014 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
SLC8B1-213ENST00000552014 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
SLC8B1-213ENST00000552014 MIER1Q8N108 512 aa18.84■□□□□ 0.61
SLC8B1-213ENST00000552014 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
SLC8B1-213ENST00000552014 APLP2Q06481 763 aa18.78■□□□□ 0.6
SLC8B1-213ENST00000552014 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
SLC8B1-213ENST00000552014 GOLGA3Q08378 1498 aa18.72■□□□□ 0.59
SLC8B1-213ENST00000552014 EEA1Q15075 1411 aa18.67■□□□□ 0.58
SLC8B1-213ENST00000552014 CLIP1P30622 1438 aa18.65■□□□□ 0.58
SLC8B1-213ENST00000552014 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
SLC8B1-213ENST00000552014 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
SLC8B1-213ENST00000552014 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
SLC8B1-213ENST00000552014 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
SLC8B1-213ENST00000552014 ITGAEP38570 1179 aa18.53■□□□□ 0.56
SLC8B1-213ENST00000552014 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
SLC8B1-213ENST00000552014 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
SLC8B1-213ENST00000552014 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
SLC8B1-213ENST00000552014 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
SLC8B1-213ENST00000552014 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
SLC8B1-213ENST00000552014 ERICH6Q7L0X2 663 aa18.36■□□□□ 0.53
SLC8B1-213ENST00000552014 KIF21BO75037 1637 aa18.36■□□□□ 0.53
SLC8B1-213ENST00000552014 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
SLC8B1-213ENST00000552014 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
SLC8B1-213ENST00000552014 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
SLC8B1-213ENST00000552014 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
SLC8B1-213ENST00000552014 BCANQ96GW7 911 aa18.23■□□□□ 0.51
SLC8B1-213ENST00000552014 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
SLC8B1-213ENST00000552014 CFTRP13569 1480 aa18.2■□□□□ 0.5
SLC8B1-213ENST00000552014 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
SLC8B1-213ENST00000552014 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
SLC8B1-213ENST00000552014 HIRIP3Q9BW71 556 aaPredicted RBP18.16■□□□□ 0.5
SLC8B1-213ENST00000552014 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
SLC8B1-213ENST00000552014 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
SLC8B1-213ENST00000552014 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
SLC8B1-213ENST00000552014 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
SLC8B1-213ENST00000552014 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
SLC8B1-213ENST00000552014 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
SLC8B1-213ENST00000552014 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
SLC8B1-213ENST00000552014 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
SLC8B1-213ENST00000552014 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.49
SLC8B1-213ENST00000552014 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
SLC8B1-213ENST00000552014 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms