RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
PITRM1-201ENST00000224949 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
PITRM1-201ENST00000224949 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
PITRM1-201ENST00000224949 HRCP23327 699 aa21.08■□□□□ 0.96
PITRM1-201ENST00000224949 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
PITRM1-201ENST00000224949 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
PITRM1-201ENST00000224949 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
PITRM1-201ENST00000224949 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.93
PITRM1-201ENST00000224949 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.93
PITRM1-201ENST00000224949 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
PITRM1-201ENST00000224949 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.89
PITRM1-201ENST00000224949 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
PITRM1-201ENST00000224949 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
PITRM1-201ENST00000224949 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
PITRM1-201ENST00000224949 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.82
PITRM1-201ENST00000224949 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
PITRM1-201ENST00000224949 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
PITRM1-201ENST00000224949 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
PITRM1-201ENST00000224949 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.77
PITRM1-201ENST00000224949 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
PITRM1-201ENST00000224949 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
PITRM1-201ENST00000224949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
PITRM1-201ENST00000224949 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
PITRM1-201ENST00000224949 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
PITRM1-201ENST00000224949 ABCC9O60706 1549 aa19.5■□□□□ 0.71
PITRM1-201ENST00000224949 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
PITRM1-201ENST00000224949 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
PITRM1-201ENST00000224949 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
PITRM1-201ENST00000224949 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
PITRM1-201ENST00000224949 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
PITRM1-201ENST00000224949 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
PITRM1-201ENST00000224949 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
PITRM1-201ENST00000224949 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
PITRM1-201ENST00000224949 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
PITRM1-201ENST00000224949 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
PITRM1-201ENST00000224949 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
PITRM1-201ENST00000224949 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
PITRM1-201ENST00000224949 WIZO95785 1651 aa18.99■□□□□ 0.63
PITRM1-201ENST00000224949 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
PITRM1-201ENST00000224949 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
PITRM1-201ENST00000224949 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
PITRM1-201ENST00000224949 MIER1Q8N108 512 aa18.88■□□□□ 0.61
PITRM1-201ENST00000224949 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
PITRM1-201ENST00000224949 MYT1Q01538 1121 aa18.87■□□□□ 0.61
PITRM1-201ENST00000224949 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
PITRM1-201ENST00000224949 SOGA1O94964 1423 aa18.82■□□□□ 0.6
PITRM1-201ENST00000224949 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
PITRM1-201ENST00000224949 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
PITRM1-201ENST00000224949 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
PITRM1-201ENST00000224949 APLP2Q06481 763 aa18.71■□□□□ 0.59
PITRM1-201ENST00000224949 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
PITRM1-201ENST00000224949 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
PITRM1-201ENST00000224949 NACADO15069 1562 aa18.67■□□□□ 0.58
PITRM1-201ENST00000224949 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
PITRM1-201ENST00000224949 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
PITRM1-201ENST00000224949 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
PITRM1-201ENST00000224949 EEA1Q15075 1411 aa18.49■□□□□ 0.55
PITRM1-201ENST00000224949 CLIP1P30622 1438 aa18.49■□□□□ 0.55
PITRM1-201ENST00000224949 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
PITRM1-201ENST00000224949 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
PITRM1-201ENST00000224949 ITGAEP38570 1179 aa18.42■□□□□ 0.54
PITRM1-201ENST00000224949 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
PITRM1-201ENST00000224949 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
PITRM1-201ENST00000224949 BCANQ96GW7 911 aa18.37■□□□□ 0.53
PITRM1-201ENST00000224949 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
PITRM1-201ENST00000224949 VPS8Q8N3P4 1428 aa18.34■□□□□ 0.53
PITRM1-201ENST00000224949 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
PITRM1-201ENST00000224949 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
PITRM1-201ENST00000224949 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
PITRM1-201ENST00000224949 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
PITRM1-201ENST00000224949 TSHZ2Q9NRE2 1034 aa18.24■□□□□ 0.51
PITRM1-201ENST00000224949 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
PITRM1-201ENST00000224949 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
PITRM1-201ENST00000224949 KIF21BO75037 1637 aa18.16■□□□□ 0.5
PITRM1-201ENST00000224949 FKBP8Q14318 412 aa18.14■□□□□ 0.5
PITRM1-201ENST00000224949 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
PITRM1-201ENST00000224949 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
PITRM1-201ENST00000224949 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
PITRM1-201ENST00000224949 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.48
PITRM1-201ENST00000224949 NEFLP07196 543 aa18.04■□□□□ 0.48
PITRM1-201ENST00000224949 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
PITRM1-201ENST00000224949 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
PITRM1-201ENST00000224949 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
PITRM1-201ENST00000224949 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
PITRM1-201ENST00000224949 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
PITRM1-201ENST00000224949 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
PITRM1-201ENST00000224949 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
PITRM1-201ENST00000224949 RAB3GAP2Q9H2M9 1393 aa17.95■□□□□ 0.46
PITRM1-201ENST00000224949 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
PITRM1-201ENST00000224949 ATAD2BQ9ULI0 1458 aa17.91■□□□□ 0.46
PITRM1-201ENST00000224949 P3H3Q8IVL6 736 aa17.89■□□□□ 0.46
PITRM1-201ENST00000224949 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
PITRM1-201ENST00000224949 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
PITRM1-201ENST00000224949 ANP32CO43423 234 aa17.88■□□□□ 0.45
PITRM1-201ENST00000224949 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
PITRM1-201ENST00000224949 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
PITRM1-201ENST00000224949 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
PITRM1-201ENST00000224949 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
PITRM1-201ENST00000224949 KIF27Q86VH2 1401 aa17.8■□□□□ 0.44
PITRM1-201ENST00000224949 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms