RNA–Protein interactions for RNA: ENST00000369151.7

CACUL1-201, Transcript of CDK2 associated cullin domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACUL1, Length 11,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-201ENST00000369151 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
CACUL1-201ENST00000369151 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
CACUL1-201ENST00000369151 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
CACUL1-201ENST00000369151 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
CACUL1-201ENST00000369151 APLP2Q06481 763 aa19.28■□□□□ 0.68
CACUL1-201ENST00000369151 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
CACUL1-201ENST00000369151 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
CACUL1-201ENST00000369151 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
CACUL1-201ENST00000369151 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.6
CACUL1-201ENST00000369151 MYT1Q01538 1121 aa18.8■□□□□ 0.6
CACUL1-201ENST00000369151 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
CACUL1-201ENST00000369151 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
CACUL1-201ENST00000369151 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
CACUL1-201ENST00000369151 NEFLP07196 543 aa18.54■□□□□ 0.56
CACUL1-201ENST00000369151 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
CACUL1-201ENST00000369151 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
CACUL1-201ENST00000369151 DAXXQ9UER7 740 aaPredicted RBP18.28■□□□□ 0.52
CACUL1-201ENST00000369151 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
CACUL1-201ENST00000369151 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
CACUL1-201ENST00000369151 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
CACUL1-201ENST00000369151 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
CACUL1-201ENST00000369151 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
CACUL1-201ENST00000369151 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
CACUL1-201ENST00000369151 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
CACUL1-201ENST00000369151 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
CACUL1-201ENST00000369151 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
CACUL1-201ENST00000369151 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
CACUL1-201ENST00000369151 POLR3GLQ9BT43 218 aa17.57■□□□□ 0.4
CACUL1-201ENST00000369151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
CACUL1-201ENST00000369151 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
CACUL1-201ENST00000369151 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
CACUL1-201ENST00000369151 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
CACUL1-201ENST00000369151 ITGAEP38570 1179 aa17.39■□□□□ 0.37
CACUL1-201ENST00000369151 HRCP23327 699 aa17.37■□□□□ 0.37
CACUL1-201ENST00000369151 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
CACUL1-201ENST00000369151 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
CACUL1-201ENST00000369151 NEFMP07197 916 aa17.2■□□□□ 0.34
CACUL1-201ENST00000369151 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
CACUL1-201ENST00000369151 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
CACUL1-201ENST00000369151 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
CACUL1-201ENST00000369151 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
CACUL1-201ENST00000369151 ANP32CO43423 234 aa17.09■□□□□ 0.33
CACUL1-201ENST00000369151 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
CACUL1-201ENST00000369151 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
CACUL1-201ENST00000369151 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
CACUL1-201ENST00000369151 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
CACUL1-201ENST00000369151 SLC24A1O60721 1099 aa17■□□□□ 0.31
CACUL1-201ENST00000369151 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.31
CACUL1-201ENST00000369151 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
CACUL1-201ENST00000369151 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
CACUL1-201ENST00000369151 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
CACUL1-201ENST00000369151 BCANQ96GW7 911 aa16.81■□□□□ 0.28
CACUL1-201ENST00000369151 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
CACUL1-201ENST00000369151 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
CACUL1-201ENST00000369151 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
CACUL1-201ENST00000369151 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
CACUL1-201ENST00000369151 BCL11AQ9H165 835 aa16.69■□□□□ 0.26
CACUL1-201ENST00000369151 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
CACUL1-201ENST00000369151 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
CACUL1-201ENST00000369151 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
CACUL1-201ENST00000369151 FBLN2P98095 1184 aa16.55■□□□□ 0.24
CACUL1-201ENST00000369151 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
CACUL1-201ENST00000369151 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
CACUL1-201ENST00000369151 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
CACUL1-201ENST00000369151 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
CACUL1-201ENST00000369151 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
CACUL1-201ENST00000369151 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
CACUL1-201ENST00000369151 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
CACUL1-201ENST00000369151 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACUL1-201ENST00000369151 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
CACUL1-201ENST00000369151 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
CACUL1-201ENST00000369151 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
CACUL1-201ENST00000369151 BECN1Q14457 450 aa16.38■□□□□ 0.21
CACUL1-201ENST00000369151 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
CACUL1-201ENST00000369151 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
CACUL1-201ENST00000369151 GOLGA6L22H0YM25 854 aa16.37■□□□□ 0.21
CACUL1-201ENST00000369151 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACUL1-201ENST00000369151 FKBP8Q14318 412 aa16.35■□□□□ 0.21
CACUL1-201ENST00000369151 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACUL1-201ENST00000369151 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
CACUL1-201ENST00000369151 ZRSR1Q15695 479 aaKnown RBP16.33■□□□□ 0.2
CACUL1-201ENST00000369151 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
CACUL1-201ENST00000369151 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
CACUL1-201ENST00000369151 ABCC9O60706 1549 aa16.28■□□□□ 0.2
CACUL1-201ENST00000369151 FAM9BQ8IZU0 186 aa16.25■□□□□ 0.19
CACUL1-201ENST00000369151 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
CACUL1-201ENST00000369151 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACUL1-201ENST00000369151 NBR1Q14596 966 aa16.2■□□□□ 0.18
CACUL1-201ENST00000369151 P3H3Q8IVL6 736 aa16.18■□□□□ 0.18
CACUL1-201ENST00000369151 GOLGA6L6A8MZA4 724 aa16.18■□□□□ 0.18
CACUL1-201ENST00000369151 TSPY4P0CV99 314 aa16.16■□□□□ 0.18
CACUL1-201ENST00000369151 TSPY10P0CW01 314 aa16.16■□□□□ 0.18
CACUL1-201ENST00000369151 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
CACUL1-201ENST00000369151 ARXQ96QS3 562 aa16.14■□□□□ 0.17
CACUL1-201ENST00000369151 NRDCO43847 1150 aa16.14■□□□□ 0.17
CACUL1-201ENST00000369151 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
CACUL1-201ENST00000369151 DNTTIP2Q5QJE6 756 aaKnown RBP16.12■□□□□ 0.17
CACUL1-201ENST00000369151 CDCA8Q53HL2 280 aa16.12■□□□□ 0.17
CACUL1-201ENST00000369151 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
CACUL1-201ENST00000369151 PTMAP06454 111 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms