RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
MSC-AS1-204ENST00000518916 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.42
MSC-AS1-204ENST00000518916 ABCC9O60706 1549 aa29.48■■■□□ 2.31
MSC-AS1-204ENST00000518916 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
MSC-AS1-204ENST00000518916 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
MSC-AS1-204ENST00000518916 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
MSC-AS1-204ENST00000518916 NACADO15069 1562 aa28.35■■■□□ 2.13
MSC-AS1-204ENST00000518916 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
MSC-AS1-204ENST00000518916 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
MSC-AS1-204ENST00000518916 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.03
MSC-AS1-204ENST00000518916 SCRIBQ14160 1630 aa27.56■■■□□ 2
MSC-AS1-204ENST00000518916 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
MSC-AS1-204ENST00000518916 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
MSC-AS1-204ENST00000518916 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
MSC-AS1-204ENST00000518916 DNAJC5BQ9UF47 199 aa27.33■■□□□ 1.97
MSC-AS1-204ENST00000518916 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
MSC-AS1-204ENST00000518916 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
MSC-AS1-204ENST00000518916 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
MSC-AS1-204ENST00000518916 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
MSC-AS1-204ENST00000518916 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
MSC-AS1-204ENST00000518916 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
MSC-AS1-204ENST00000518916 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
MSC-AS1-204ENST00000518916 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
MSC-AS1-204ENST00000518916 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
MSC-AS1-204ENST00000518916 WIZO95785 1651 aa26.16■■□□□ 1.78
MSC-AS1-204ENST00000518916 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
MSC-AS1-204ENST00000518916 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
MSC-AS1-204ENST00000518916 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
MSC-AS1-204ENST00000518916 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
MSC-AS1-204ENST00000518916 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
MSC-AS1-204ENST00000518916 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
MSC-AS1-204ENST00000518916 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
MSC-AS1-204ENST00000518916 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
MSC-AS1-204ENST00000518916 NESP48681 1621 aa25.47■■□□□ 1.67
MSC-AS1-204ENST00000518916 ERCC6Q03468 1493 aa25.41■■□□□ 1.66
MSC-AS1-204ENST00000518916 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
MSC-AS1-204ENST00000518916 CUX2O14529 1486 aa25.36■■□□□ 1.65
MSC-AS1-204ENST00000518916 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
MSC-AS1-204ENST00000518916 CFTRP13569 1480 aa25.2■■□□□ 1.62
MSC-AS1-204ENST00000518916 PRDM2Q13029 1718 aa25.19■■□□□ 1.62
MSC-AS1-204ENST00000518916 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
MSC-AS1-204ENST00000518916 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
MSC-AS1-204ENST00000518916 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
MSC-AS1-204ENST00000518916 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
MSC-AS1-204ENST00000518916 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
MSC-AS1-204ENST00000518916 WDR62O43379 1518 aa24.98■■□□□ 1.59
MSC-AS1-204ENST00000518916 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
MSC-AS1-204ENST00000518916 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
MSC-AS1-204ENST00000518916 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
MSC-AS1-204ENST00000518916 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
MSC-AS1-204ENST00000518916 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
MSC-AS1-204ENST00000518916 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
MSC-AS1-204ENST00000518916 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
MSC-AS1-204ENST00000518916 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
MSC-AS1-204ENST00000518916 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
MSC-AS1-204ENST00000518916 CUX1P39880 1505 aa24.71■■□□□ 1.55
MSC-AS1-204ENST00000518916 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
MSC-AS1-204ENST00000518916 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
MSC-AS1-204ENST00000518916 IFT140Q96RY7 1462 aa24.53■■□□□ 1.52
MSC-AS1-204ENST00000518916 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
MSC-AS1-204ENST00000518916 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
MSC-AS1-204ENST00000518916 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
MSC-AS1-204ENST00000518916 EEA1Q15075 1411 aa24.38■■□□□ 1.49
MSC-AS1-204ENST00000518916 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
MSC-AS1-204ENST00000518916 SOGA1O94964 1423 aa24.35■■□□□ 1.49
MSC-AS1-204ENST00000518916 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
MSC-AS1-204ENST00000518916 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
MSC-AS1-204ENST00000518916 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
MSC-AS1-204ENST00000518916 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
MSC-AS1-204ENST00000518916 FAM9AQ8IZU1 332 aaPredicted RBP24.28■■□□□ 1.48
MSC-AS1-204ENST00000518916 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
MSC-AS1-204ENST00000518916 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
MSC-AS1-204ENST00000518916 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
MSC-AS1-204ENST00000518916 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
MSC-AS1-204ENST00000518916 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
MSC-AS1-204ENST00000518916 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
MSC-AS1-204ENST00000518916 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
MSC-AS1-204ENST00000518916 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
MSC-AS1-204ENST00000518916 KIF21BO75037 1637 aa24.07■■□□□ 1.44
MSC-AS1-204ENST00000518916 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
MSC-AS1-204ENST00000518916 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
MSC-AS1-204ENST00000518916 CUL7Q14999 1698 aa24.05■■□□□ 1.44
MSC-AS1-204ENST00000518916 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
MSC-AS1-204ENST00000518916 MAGI1Q96QZ7 1491 aaPredicted RBP24.02■■□□□ 1.44
MSC-AS1-204ENST00000518916 IGF1RP08069 1367 aa24■■□□□ 1.43
MSC-AS1-204ENST00000518916 GOLGA3Q08378 1498 aa24■■□□□ 1.43
MSC-AS1-204ENST00000518916 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
MSC-AS1-204ENST00000518916 CHD1O14646 1710 aa23.98■■□□□ 1.43
MSC-AS1-204ENST00000518916 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
MSC-AS1-204ENST00000518916 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
MSC-AS1-204ENST00000518916 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
MSC-AS1-204ENST00000518916 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
MSC-AS1-204ENST00000518916 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
MSC-AS1-204ENST00000518916 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
MSC-AS1-204ENST00000518916 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
MSC-AS1-204ENST00000518916 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
MSC-AS1-204ENST00000518916 FBLN2P98095 1184 aa23.85■■□□□ 1.41
MSC-AS1-204ENST00000518916 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
MSC-AS1-204ENST00000518916 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
MSC-AS1-204ENST00000518916 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms