RNA–Protein interactions for RNA: ENST00000399069.7

LCMT1-203, Transcript of leucine carboxyl methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCMT1, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-203ENST00000399069 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
LCMT1-203ENST00000399069 CCDC180Q9P1Z9 1646 aa29.84■■■□□ 2.37
LCMT1-203ENST00000399069 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
LCMT1-203ENST00000399069 ABCC9O60706 1549 aa28.23■■■□□ 2.11
LCMT1-203ENST00000399069 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
LCMT1-203ENST00000399069 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
LCMT1-203ENST00000399069 DCAF8L2P0C7V8 631 aa27.86■■■□□ 2.05
LCMT1-203ENST00000399069 NACADO15069 1562 aa27.8■■■□□ 2.04
LCMT1-203ENST00000399069 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
LCMT1-203ENST00000399069 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
LCMT1-203ENST00000399069 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
LCMT1-203ENST00000399069 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
LCMT1-203ENST00000399069 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
LCMT1-203ENST00000399069 PABPN1Q86U42 306 aaKnown RBP eCLIP26.46■■□□□ 1.83
LCMT1-203ENST00000399069 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
LCMT1-203ENST00000399069 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
LCMT1-203ENST00000399069 SMARCA4P51532 1647 aa26.15■■□□□ 1.78
LCMT1-203ENST00000399069 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
LCMT1-203ENST00000399069 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
LCMT1-203ENST00000399069 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
LCMT1-203ENST00000399069 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
LCMT1-203ENST00000399069 WIZO95785 1651 aa25.91■■□□□ 1.74
LCMT1-203ENST00000399069 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
LCMT1-203ENST00000399069 SMARCA2P51531 1590 aa25.8■■□□□ 1.72
LCMT1-203ENST00000399069 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
LCMT1-203ENST00000399069 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
LCMT1-203ENST00000399069 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
LCMT1-203ENST00000399069 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
LCMT1-203ENST00000399069 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
LCMT1-203ENST00000399069 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
LCMT1-203ENST00000399069 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
LCMT1-203ENST00000399069 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
LCMT1-203ENST00000399069 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
LCMT1-203ENST00000399069 CFTRP13569 1480 aa24.93■■□□□ 1.58
LCMT1-203ENST00000399069 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
LCMT1-203ENST00000399069 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
LCMT1-203ENST00000399069 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
LCMT1-203ENST00000399069 ABCC8Q09428 1581 aa24.7■■□□□ 1.55
LCMT1-203ENST00000399069 NESP48681 1621 aa24.68■■□□□ 1.54
LCMT1-203ENST00000399069 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
LCMT1-203ENST00000399069 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
LCMT1-203ENST00000399069 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
LCMT1-203ENST00000399069 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
LCMT1-203ENST00000399069 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
LCMT1-203ENST00000399069 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
LCMT1-203ENST00000399069 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
LCMT1-203ENST00000399069 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
LCMT1-203ENST00000399069 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
LCMT1-203ENST00000399069 CUX1P39880 1505 aa24.45■■□□□ 1.5
LCMT1-203ENST00000399069 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
LCMT1-203ENST00000399069 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
LCMT1-203ENST00000399069 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
LCMT1-203ENST00000399069 MRC2Q9UBG0 1479 aa24.3■■□□□ 1.48
LCMT1-203ENST00000399069 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
LCMT1-203ENST00000399069 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
LCMT1-203ENST00000399069 EEA1Q15075 1411 aa24.22■■□□□ 1.47
LCMT1-203ENST00000399069 WDR62O43379 1518 aa24.2■■□□□ 1.47
LCMT1-203ENST00000399069 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
LCMT1-203ENST00000399069 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
LCMT1-203ENST00000399069 SOGA1O94964 1423 aa24.14■■□□□ 1.45
LCMT1-203ENST00000399069 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
LCMT1-203ENST00000399069 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
LCMT1-203ENST00000399069 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
LCMT1-203ENST00000399069 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
LCMT1-203ENST00000399069 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
LCMT1-203ENST00000399069 CUX2O14529 1486 aa24.02■■□□□ 1.44
LCMT1-203ENST00000399069 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
LCMT1-203ENST00000399069 TARBP1Q13395 1621 aaKnown RBP24.01■■□□□ 1.43
LCMT1-203ENST00000399069 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
LCMT1-203ENST00000399069 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
LCMT1-203ENST00000399069 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
LCMT1-203ENST00000399069 KIF21BO75037 1637 aa23.91■■□□□ 1.42
LCMT1-203ENST00000399069 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.41
LCMT1-203ENST00000399069 CUL7Q14999 1698 aa23.82■■□□□ 1.4
LCMT1-203ENST00000399069 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
LCMT1-203ENST00000399069 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
LCMT1-203ENST00000399069 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
LCMT1-203ENST00000399069 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
LCMT1-203ENST00000399069 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
LCMT1-203ENST00000399069 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
LCMT1-203ENST00000399069 IGF1RP08069 1367 aa23.77■■□□□ 1.4
LCMT1-203ENST00000399069 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
LCMT1-203ENST00000399069 ZNF608Q9ULD9 1512 aaPredicted RBP23.73■■□□□ 1.39
LCMT1-203ENST00000399069 GRIN2BQ13224 1484 aa23.71■■□□□ 1.39
LCMT1-203ENST00000399069 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.38
LCMT1-203ENST00000399069 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
LCMT1-203ENST00000399069 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
LCMT1-203ENST00000399069 EHMT2Q96KQ7 1210 aa23.65■■□□□ 1.38
LCMT1-203ENST00000399069 ADAMTS12P58397 1594 aa23.64■■□□□ 1.37
LCMT1-203ENST00000399069 TNIKQ9UKE5 1360 aa23.64■■□□□ 1.37
LCMT1-203ENST00000399069 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
LCMT1-203ENST00000399069 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
LCMT1-203ENST00000399069 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.37
LCMT1-203ENST00000399069 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
LCMT1-203ENST00000399069 CTTNBP2Q8WZ74 1663 aa23.52■■□□□ 1.36
LCMT1-203ENST00000399069 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
LCMT1-203ENST00000399069 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
LCMT1-203ENST00000399069 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
LCMT1-203ENST00000399069 CLIP1P30622 1438 aa23.38■■□□□ 1.33
LCMT1-203ENST00000399069 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms