RNA–Protein interactions for RNA: ENST00000377255.3

ZKSCAN3-203, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-203ENST00000377255 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
ZKSCAN3-203ENST00000377255 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
ZKSCAN3-203ENST00000377255 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
ZKSCAN3-203ENST00000377255 SHROOM4Q9ULL8 1493 aa21.06■□□□□ 0.96
ZKSCAN3-203ENST00000377255 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
ZKSCAN3-203ENST00000377255 APLP2Q06481 763 aa20■□□□□ 0.79
ZKSCAN3-203ENST00000377255 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
ZKSCAN3-203ENST00000377255 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
ZKSCAN3-203ENST00000377255 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
ZKSCAN3-203ENST00000377255 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
ZKSCAN3-203ENST00000377255 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
ZKSCAN3-203ENST00000377255 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
ZKSCAN3-203ENST00000377255 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
ZKSCAN3-203ENST00000377255 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
ZKSCAN3-203ENST00000377255 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
ZKSCAN3-203ENST00000377255 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
ZKSCAN3-203ENST00000377255 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
ZKSCAN3-203ENST00000377255 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
ZKSCAN3-203ENST00000377255 ATP1B4Q9UN42 357 aaPredicted RBP19.21■□□□□ 0.67
ZKSCAN3-203ENST00000377255 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.65
ZKSCAN3-203ENST00000377255 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
ZKSCAN3-203ENST00000377255 HRCP23327 699 aa19.02■□□□□ 0.63
ZKSCAN3-203ENST00000377255 ABCC9O60706 1549 aa18.96■□□□□ 0.63
ZKSCAN3-203ENST00000377255 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
ZKSCAN3-203ENST00000377255 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
ZKSCAN3-203ENST00000377255 NEFLP07196 543 aa18.7■□□□□ 0.58
ZKSCAN3-203ENST00000377255 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
ZKSCAN3-203ENST00000377255 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
ZKSCAN3-203ENST00000377255 ITGAEP38570 1179 aa18.68■□□□□ 0.58
ZKSCAN3-203ENST00000377255 ERICH6Q7L0X2 663 aa18.6■□□□□ 0.57
ZKSCAN3-203ENST00000377255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
ZKSCAN3-203ENST00000377255 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
ZKSCAN3-203ENST00000377255 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
ZKSCAN3-203ENST00000377255 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
ZKSCAN3-203ENST00000377255 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
ZKSCAN3-203ENST00000377255 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
ZKSCAN3-203ENST00000377255 MYT1LQ9UL68 1186 aa18.33■□□□□ 0.53
ZKSCAN3-203ENST00000377255 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
ZKSCAN3-203ENST00000377255 MYT1Q01538 1121 aa18.25■□□□□ 0.51
ZKSCAN3-203ENST00000377255 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
ZKSCAN3-203ENST00000377255 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
ZKSCAN3-203ENST00000377255 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
ZKSCAN3-203ENST00000377255 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
ZKSCAN3-203ENST00000377255 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
ZKSCAN3-203ENST00000377255 P3H3Q8IVL6 736 aa18■□□□□ 0.47
ZKSCAN3-203ENST00000377255 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
ZKSCAN3-203ENST00000377255 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
ZKSCAN3-203ENST00000377255 FBLN2P98095 1184 aa17.98■□□□□ 0.47
ZKSCAN3-203ENST00000377255 ANP32CO43423 234 aa17.95■□□□□ 0.46
ZKSCAN3-203ENST00000377255 DAXXQ9UER7 740 aaPredicted RBP17.95■□□□□ 0.46
ZKSCAN3-203ENST00000377255 NACADO15069 1562 aa17.94■□□□□ 0.46
ZKSCAN3-203ENST00000377255 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
ZKSCAN3-203ENST00000377255 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
ZKSCAN3-203ENST00000377255 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
ZKSCAN3-203ENST00000377255 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
ZKSCAN3-203ENST00000377255 EEA1Q15075 1411 aa17.83■□□□□ 0.44
ZKSCAN3-203ENST00000377255 ARID3CA6NKF2 412 aa17.79■□□□□ 0.44
ZKSCAN3-203ENST00000377255 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
ZKSCAN3-203ENST00000377255 ACIN1Q9UKV3 1341 aaKnown RBP17.76■□□□□ 0.43
ZKSCAN3-203ENST00000377255 CLIP1P30622 1438 aa17.74■□□□□ 0.43
ZKSCAN3-203ENST00000377255 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
ZKSCAN3-203ENST00000377255 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
ZKSCAN3-203ENST00000377255 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
ZKSCAN3-203ENST00000377255 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
ZKSCAN3-203ENST00000377255 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
ZKSCAN3-203ENST00000377255 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
ZKSCAN3-203ENST00000377255 BCANQ96GW7 911 aa17.66■□□□□ 0.42
ZKSCAN3-203ENST00000377255 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
ZKSCAN3-203ENST00000377255 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
ZKSCAN3-203ENST00000377255 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
ZKSCAN3-203ENST00000377255 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
ZKSCAN3-203ENST00000377255 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
ZKSCAN3-203ENST00000377255 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
ZKSCAN3-203ENST00000377255 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
ZKSCAN3-203ENST00000377255 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
ZKSCAN3-203ENST00000377255 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
ZKSCAN3-203ENST00000377255 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
ZKSCAN3-203ENST00000377255 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
ZKSCAN3-203ENST00000377255 TSPY4P0CV99 314 aa17.45■□□□□ 0.38
ZKSCAN3-203ENST00000377255 TSPY10P0CW01 314 aa17.45■□□□□ 0.38
ZKSCAN3-203ENST00000377255 NEFMP07197 916 aa17.41■□□□□ 0.38
ZKSCAN3-203ENST00000377255 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
ZKSCAN3-203ENST00000377255 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
ZKSCAN3-203ENST00000377255 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZKSCAN3-203ENST00000377255 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
ZKSCAN3-203ENST00000377255 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
ZKSCAN3-203ENST00000377255 FKBP8Q14318 412 aa17.36■□□□□ 0.37
ZKSCAN3-203ENST00000377255 MIER1Q8N108 512 aa17.34■□□□□ 0.37
ZKSCAN3-203ENST00000377255 FAM9BQ8IZU0 186 aa17.32■□□□□ 0.36
ZKSCAN3-203ENST00000377255 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
ZKSCAN3-203ENST00000377255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
ZKSCAN3-203ENST00000377255 CHGAP10645 457 aaKnown RBP17.31■□□□□ 0.36
ZKSCAN3-203ENST00000377255 SOGA1O94964 1423 aa17.3■□□□□ 0.36
ZKSCAN3-203ENST00000377255 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
ZKSCAN3-203ENST00000377255 EIF4G2P78344 907 aaKnown RBP eCLIP17.3■□□□□ 0.369e-7■■■■□ 21.9
ZKSCAN3-203ENST00000377255 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
ZKSCAN3-203ENST00000377255 ESF1Q9H501 851 aaKnown RBP17.28■□□□□ 0.36
ZKSCAN3-203ENST00000377255 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
ZKSCAN3-203ENST00000377255 ANP32AP39687 249 aaKnown RBP17.27■□□□□ 0.35
ZKSCAN3-203ENST00000377255 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms