RNA–Protein interactions for RNA: ENST00000358355.5

USP20-202, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-202ENST00000358355 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
USP20-202ENST00000358355 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
USP20-202ENST00000358355 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.06
USP20-202ENST00000358355 ABCC9O60706 1549 aa21.51■■□□□ 1.03
USP20-202ENST00000358355 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
USP20-202ENST00000358355 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
USP20-202ENST00000358355 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
USP20-202ENST00000358355 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.9
USP20-202ENST00000358355 APLP2Q06481 763 aa20.41■□□□□ 0.86
USP20-202ENST00000358355 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
USP20-202ENST00000358355 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
USP20-202ENST00000358355 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
USP20-202ENST00000358355 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
USP20-202ENST00000358355 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
USP20-202ENST00000358355 NACADO15069 1562 aa20.01■□□□□ 0.79
USP20-202ENST00000358355 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
USP20-202ENST00000358355 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
USP20-202ENST00000358355 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
USP20-202ENST00000358355 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
USP20-202ENST00000358355 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
USP20-202ENST00000358355 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
USP20-202ENST00000358355 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
USP20-202ENST00000358355 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
USP20-202ENST00000358355 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
USP20-202ENST00000358355 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
USP20-202ENST00000358355 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
USP20-202ENST00000358355 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
USP20-202ENST00000358355 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
USP20-202ENST00000358355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
USP20-202ENST00000358355 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
USP20-202ENST00000358355 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
USP20-202ENST00000358355 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
USP20-202ENST00000358355 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
USP20-202ENST00000358355 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
USP20-202ENST00000358355 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
USP20-202ENST00000358355 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
USP20-202ENST00000358355 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
USP20-202ENST00000358355 ITGAEP38570 1179 aa19.05■□□□□ 0.64
USP20-202ENST00000358355 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
USP20-202ENST00000358355 FBLN2P98095 1184 aa18.95■□□□□ 0.62
USP20-202ENST00000358355 MROH2BQ7Z745 1585 aa18.95■□□□□ 0.62
USP20-202ENST00000358355 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
USP20-202ENST00000358355 BICRAQ9NZM4 1560 aa18.85■□□□□ 0.61
USP20-202ENST00000358355 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
USP20-202ENST00000358355 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
USP20-202ENST00000358355 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
USP20-202ENST00000358355 NEFLP07196 543 aa18.73■□□□□ 0.59
USP20-202ENST00000358355 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
USP20-202ENST00000358355 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
USP20-202ENST00000358355 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
USP20-202ENST00000358355 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
USP20-202ENST00000358355 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
USP20-202ENST00000358355 WIZO95785 1651 aa18.66■□□□□ 0.58
USP20-202ENST00000358355 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
USP20-202ENST00000358355 HRCP23327 699 aa18.65■□□□□ 0.58
USP20-202ENST00000358355 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
USP20-202ENST00000358355 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
USP20-202ENST00000358355 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
USP20-202ENST00000358355 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
USP20-202ENST00000358355 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
USP20-202ENST00000358355 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
USP20-202ENST00000358355 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
USP20-202ENST00000358355 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
USP20-202ENST00000358355 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
USP20-202ENST00000358355 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
USP20-202ENST00000358355 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
USP20-202ENST00000358355 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
USP20-202ENST00000358355 NESP48681 1621 aa18.38■□□□□ 0.53
USP20-202ENST00000358355 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
USP20-202ENST00000358355 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
USP20-202ENST00000358355 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
USP20-202ENST00000358355 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
USP20-202ENST00000358355 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
USP20-202ENST00000358355 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
USP20-202ENST00000358355 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
USP20-202ENST00000358355 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
USP20-202ENST00000358355 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
USP20-202ENST00000358355 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
USP20-202ENST00000358355 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
USP20-202ENST00000358355 SOGA1O94964 1423 aa18.19■□□□□ 0.5
USP20-202ENST00000358355 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP20-202ENST00000358355 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
USP20-202ENST00000358355 CUX2O14529 1486 aa18.13■□□□□ 0.49
USP20-202ENST00000358355 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
USP20-202ENST00000358355 CFTRP13569 1480 aa18.08■□□□□ 0.48
USP20-202ENST00000358355 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
USP20-202ENST00000358355 ANP32CO43423 234 aa18.03■□□□□ 0.48
USP20-202ENST00000358355 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
USP20-202ENST00000358355 BCANQ96GW7 911 aa18.01■□□□□ 0.47
USP20-202ENST00000358355 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
USP20-202ENST00000358355 EEA1Q15075 1411 aa17.97■□□□□ 0.47
USP20-202ENST00000358355 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
USP20-202ENST00000358355 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
USP20-202ENST00000358355 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
USP20-202ENST00000358355 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
USP20-202ENST00000358355 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
USP20-202ENST00000358355 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
USP20-202ENST00000358355 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
USP20-202ENST00000358355 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
USP20-202ENST00000358355 CLIP1P30622 1438 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms