RNA–Protein interactions for RNA: ENST00000329468.3

NPAP1-201, Transcript of nuclear pore associated protein 1, humanhuman

APPRIS P1 BASIC

Gene NPAP1, Length 7,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1-201ENST00000329468 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
NPAP1-201ENST00000329468 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
NPAP1-201ENST00000329468 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
NPAP1-201ENST00000329468 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
NPAP1-201ENST00000329468 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.83
NPAP1-201ENST00000329468 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
NPAP1-201ENST00000329468 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
NPAP1-201ENST00000329468 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
NPAP1-201ENST00000329468 APLP2Q06481 763 aa19.87■□□□□ 0.77
NPAP1-201ENST00000329468 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
NPAP1-201ENST00000329468 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
NPAP1-201ENST00000329468 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
NPAP1-201ENST00000329468 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
NPAP1-201ENST00000329468 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
NPAP1-201ENST00000329468 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
NPAP1-201ENST00000329468 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
NPAP1-201ENST00000329468 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
NPAP1-201ENST00000329468 MYT1LQ9UL68 1186 aa19.09■□□□□ 0.65
NPAP1-201ENST00000329468 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
NPAP1-201ENST00000329468 YTHDC1Q96MU7 727 aaKnown RBP19.04■□□□□ 0.64
NPAP1-201ENST00000329468 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
NPAP1-201ENST00000329468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
NPAP1-201ENST00000329468 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
NPAP1-201ENST00000329468 ITGAEP38570 1179 aa18.91■□□□□ 0.62
NPAP1-201ENST00000329468 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
NPAP1-201ENST00000329468 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
NPAP1-201ENST00000329468 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
NPAP1-201ENST00000329468 NEFLP07196 543 aa18.62■□□□□ 0.57
NPAP1-201ENST00000329468 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
NPAP1-201ENST00000329468 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
NPAP1-201ENST00000329468 MYT1Q01538 1121 aa18.47■□□□□ 0.55
NPAP1-201ENST00000329468 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
NPAP1-201ENST00000329468 DAXXQ9UER7 740 aaPredicted RBP18.28■□□□□ 0.52
NPAP1-201ENST00000329468 ABCC9O60706 1549 aa18.25■□□□□ 0.51
NPAP1-201ENST00000329468 FAM50AQ14320 339 aaKnown RBP18.25■□□□□ 0.51
NPAP1-201ENST00000329468 FBLN2P98095 1184 aa18.24■□□□□ 0.51
NPAP1-201ENST00000329468 TRIM26Q12899 539 aaPredicted RBP18.23■□□□□ 0.51
NPAP1-201ENST00000329468 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
NPAP1-201ENST00000329468 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
NPAP1-201ENST00000329468 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
NPAP1-201ENST00000329468 ARID3CA6NKF2 412 aa18.13■□□□□ 0.49
NPAP1-201ENST00000329468 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
NPAP1-201ENST00000329468 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
NPAP1-201ENST00000329468 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.49
NPAP1-201ENST00000329468 BCANQ96GW7 911 aa18.06■□□□□ 0.48
NPAP1-201ENST00000329468 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
NPAP1-201ENST00000329468 HRCP23327 699 aa18.03■□□□□ 0.48
NPAP1-201ENST00000329468 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
NPAP1-201ENST00000329468 ZNF316A6NFI3 1004 aaPredicted RBP17.9■□□□□ 0.46
NPAP1-201ENST00000329468 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
NPAP1-201ENST00000329468 ZNF777Q9ULD5 760 aaPredicted RBP17.78■□□□□ 0.44
NPAP1-201ENST00000329468 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
NPAP1-201ENST00000329468 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
NPAP1-201ENST00000329468 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
NPAP1-201ENST00000329468 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
NPAP1-201ENST00000329468 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
NPAP1-201ENST00000329468 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
NPAP1-201ENST00000329468 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
NPAP1-201ENST00000329468 ANP32CO43423 234 aa17.56■□□□□ 0.4
NPAP1-201ENST00000329468 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
NPAP1-201ENST00000329468 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
NPAP1-201ENST00000329468 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
NPAP1-201ENST00000329468 NEFMP07197 916 aa17.47■□□□□ 0.39
NPAP1-201ENST00000329468 A0A0G2JS52 829 aa17.46■□□□□ 0.38
NPAP1-201ENST00000329468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.44■□□□□ 0.38
NPAP1-201ENST00000329468 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
NPAP1-201ENST00000329468 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
NPAP1-201ENST00000329468 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
NPAP1-201ENST00000329468 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
NPAP1-201ENST00000329468 CDK11AQ9UQ88 783 aaPredicted RBP17.35■□□□□ 0.37
NPAP1-201ENST00000329468 CHIC2Q9UKJ5 165 aa17.33■□□□□ 0.36
NPAP1-201ENST00000329468 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
NPAP1-201ENST00000329468 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
NPAP1-201ENST00000329468 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
NPAP1-201ENST00000329468 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
NPAP1-201ENST00000329468 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
NPAP1-201ENST00000329468 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
NPAP1-201ENST00000329468 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
NPAP1-201ENST00000329468 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
NPAP1-201ENST00000329468 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
NPAP1-201ENST00000329468 ARXQ96QS3 562 aa17.11■□□□□ 0.33
NPAP1-201ENST00000329468 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
NPAP1-201ENST00000329468 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
NPAP1-201ENST00000329468 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
NPAP1-201ENST00000329468 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
NPAP1-201ENST00000329468 FKBP8Q14318 412 aa17.06■□□□□ 0.32
NPAP1-201ENST00000329468 HNRNPUQ00839 825 aaKnown RBP eCLIP17.05■□□□□ 0.32
NPAP1-201ENST00000329468 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
NPAP1-201ENST00000329468 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
NPAP1-201ENST00000329468 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
NPAP1-201ENST00000329468 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
NPAP1-201ENST00000329468 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
NPAP1-201ENST00000329468 PPP1R15AO75807 674 aaPredicted RBP16.96■□□□□ 0.31
NPAP1-201ENST00000329468 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.3
NPAP1-201ENST00000329468 TULP1O00294 542 aaPredicted RBP16.94■□□□□ 0.3
NPAP1-201ENST00000329468 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
NPAP1-201ENST00000329468 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
NPAP1-201ENST00000329468 NBR1Q14596 966 aa16.91■□□□□ 0.3
NPAP1-201ENST00000329468 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
NPAP1-201ENST00000329468 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms