RNA–Protein interactions for RNA: ENST00000619635.1

PNMA3-203, Transcript of PNMA family member 3, humanhuman

TSL 1 (best) BASIC

Gene PNMA3, Length 3,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3-203ENST00000619635 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
PNMA3-203ENST00000619635 SHROOM4Q9ULL8 1493 aa22.95■■□□□ 1.27
PNMA3-203ENST00000619635 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
PNMA3-203ENST00000619635 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
PNMA3-203ENST00000619635 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
PNMA3-203ENST00000619635 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
PNMA3-203ENST00000619635 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
PNMA3-203ENST00000619635 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
PNMA3-203ENST00000619635 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
PNMA3-203ENST00000619635 PPARGC1BQ86YN6 1023 aaKnown RBP21.2■□□□□ 0.98
PNMA3-203ENST00000619635 HRCP23327 699 aa20.99■□□□□ 0.95
PNMA3-203ENST00000619635 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
PNMA3-203ENST00000619635 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.93
PNMA3-203ENST00000619635 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
PNMA3-203ENST00000619635 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
PNMA3-203ENST00000619635 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.9
PNMA3-203ENST00000619635 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
PNMA3-203ENST00000619635 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
PNMA3-203ENST00000619635 CCER1Q8TC90 406 aaPredicted RBP20.26■□□□□ 0.83
PNMA3-203ENST00000619635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
PNMA3-203ENST00000619635 ABCC9O60706 1549 aa20.23■□□□□ 0.83
PNMA3-203ENST00000619635 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
PNMA3-203ENST00000619635 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
PNMA3-203ENST00000619635 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
PNMA3-203ENST00000619635 YTHDC1Q96MU7 727 aaKnown RBP19.98■□□□□ 0.79
PNMA3-203ENST00000619635 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
PNMA3-203ENST00000619635 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
PNMA3-203ENST00000619635 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
PNMA3-203ENST00000619635 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
PNMA3-203ENST00000619635 APLP2Q06481 763 aa19.76■□□□□ 0.75
PNMA3-203ENST00000619635 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
PNMA3-203ENST00000619635 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
PNMA3-203ENST00000619635 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
PNMA3-203ENST00000619635 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
PNMA3-203ENST00000619635 ITGAEP38570 1179 aa19.61■□□□□ 0.73
PNMA3-203ENST00000619635 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
PNMA3-203ENST00000619635 NACADO15069 1562 aa19.53■□□□□ 0.72
PNMA3-203ENST00000619635 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.71
PNMA3-203ENST00000619635 GTF3C3Q9Y5Q9 886 aa19.52■□□□□ 0.71
PNMA3-203ENST00000619635 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
PNMA3-203ENST00000619635 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
PNMA3-203ENST00000619635 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
PNMA3-203ENST00000619635 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
PNMA3-203ENST00000619635 SOGA1O94964 1423 aa19.3■□□□□ 0.68
PNMA3-203ENST00000619635 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
PNMA3-203ENST00000619635 WIZO95785 1651 aa19.29■□□□□ 0.68
PNMA3-203ENST00000619635 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
PNMA3-203ENST00000619635 ZNF316A6NFI3 1004 aaPredicted RBP19.24■□□□□ 0.67
PNMA3-203ENST00000619635 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
PNMA3-203ENST00000619635 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
PNMA3-203ENST00000619635 MIER1Q8N108 512 aa19.17■□□□□ 0.66
PNMA3-203ENST00000619635 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
PNMA3-203ENST00000619635 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
PNMA3-203ENST00000619635 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
PNMA3-203ENST00000619635 BCANQ96GW7 911 aa19■□□□□ 0.63
PNMA3-203ENST00000619635 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
PNMA3-203ENST00000619635 CNGB1Q14028 1251 aaPredicted RBP18.96■□□□□ 0.63
PNMA3-203ENST00000619635 CLIP1P30622 1438 aa18.95■□□□□ 0.62
PNMA3-203ENST00000619635 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
PNMA3-203ENST00000619635 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
PNMA3-203ENST00000619635 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
PNMA3-203ENST00000619635 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
PNMA3-203ENST00000619635 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
PNMA3-203ENST00000619635 ARID3CA6NKF2 412 aa18.84■□□□□ 0.61
PNMA3-203ENST00000619635 GOLGA3Q08378 1498 aa18.83■□□□□ 0.61
PNMA3-203ENST00000619635 KANK4Q5T7N3 995 aaPredicted RBP18.83■□□□□ 0.61
PNMA3-203ENST00000619635 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
PNMA3-203ENST00000619635 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
PNMA3-203ENST00000619635 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
PNMA3-203ENST00000619635 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
PNMA3-203ENST00000619635 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
PNMA3-203ENST00000619635 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
PNMA3-203ENST00000619635 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
PNMA3-203ENST00000619635 SMARCA2P51531 1590 aa18.65■□□□□ 0.58
PNMA3-203ENST00000619635 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
PNMA3-203ENST00000619635 EEA1Q15075 1411 aa18.64■□□□□ 0.57
PNMA3-203ENST00000619635 KCNH8Q96L42 1107 aa18.63■□□□□ 0.57
PNMA3-203ENST00000619635 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
PNMA3-203ENST00000619635 NEFLP07196 543 aa18.59■□□□□ 0.57
PNMA3-203ENST00000619635 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
PNMA3-203ENST00000619635 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
PNMA3-203ENST00000619635 FKBP8Q14318 412 aa18.52■□□□□ 0.56
PNMA3-203ENST00000619635 CHIC2Q9UKJ5 165 aa18.52■□□□□ 0.56
PNMA3-203ENST00000619635 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
PNMA3-203ENST00000619635 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
PNMA3-203ENST00000619635 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
PNMA3-203ENST00000619635 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
PNMA3-203ENST00000619635 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
PNMA3-203ENST00000619635 ANP32CO43423 234 aa18.41■□□□□ 0.54
PNMA3-203ENST00000619635 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
PNMA3-203ENST00000619635 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
PNMA3-203ENST00000619635 CCNB3Q8WWL7 1395 aa18.38■□□□□ 0.53
PNMA3-203ENST00000619635 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
PNMA3-203ENST00000619635 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
PNMA3-203ENST00000619635 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
PNMA3-203ENST00000619635 CUX2O14529 1486 aa18.32■□□□□ 0.52
PNMA3-203ENST00000619635 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
PNMA3-203ENST00000619635 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
PNMA3-203ENST00000619635 KIF21BO75037 1637 aa18.28■□□□□ 0.52
PNMA3-203ENST00000619635 ERICH6Q7L0X2 663 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms