RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
SEMA3F-206ENST00000434342 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
SEMA3F-206ENST00000434342 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
SEMA3F-206ENST00000434342 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
SEMA3F-206ENST00000434342 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
SEMA3F-206ENST00000434342 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
SEMA3F-206ENST00000434342 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
SEMA3F-206ENST00000434342 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
SEMA3F-206ENST00000434342 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
SEMA3F-206ENST00000434342 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
SEMA3F-206ENST00000434342 HRCP23327 699 aa20.07■□□□□ 0.8
SEMA3F-206ENST00000434342 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
SEMA3F-206ENST00000434342 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
SEMA3F-206ENST00000434342 PCGF6Q9BYE7 350 aa19.9■□□□□ 0.78
SEMA3F-206ENST00000434342 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
SEMA3F-206ENST00000434342 ABCC9O60706 1549 aa19.73■□□□□ 0.75
SEMA3F-206ENST00000434342 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
SEMA3F-206ENST00000434342 MYT1Q01538 1121 aa19.64■□□□□ 0.73
SEMA3F-206ENST00000434342 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
SEMA3F-206ENST00000434342 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
SEMA3F-206ENST00000434342 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
SEMA3F-206ENST00000434342 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
SEMA3F-206ENST00000434342 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
SEMA3F-206ENST00000434342 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
SEMA3F-206ENST00000434342 NACADO15069 1562 aa19.38■□□□□ 0.69
SEMA3F-206ENST00000434342 TRIM26Q12899 539 aaPredicted RBP19.37■□□□□ 0.69
SEMA3F-206ENST00000434342 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
SEMA3F-206ENST00000434342 WIZO95785 1651 aa19.15■□□□□ 0.66
SEMA3F-206ENST00000434342 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
SEMA3F-206ENST00000434342 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
SEMA3F-206ENST00000434342 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
SEMA3F-206ENST00000434342 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
SEMA3F-206ENST00000434342 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
SEMA3F-206ENST00000434342 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
SEMA3F-206ENST00000434342 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
SEMA3F-206ENST00000434342 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
SEMA3F-206ENST00000434342 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
SEMA3F-206ENST00000434342 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
SEMA3F-206ENST00000434342 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.59
SEMA3F-206ENST00000434342 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
SEMA3F-206ENST00000434342 BCL11AQ9H165 835 aa18.75■□□□□ 0.59
SEMA3F-206ENST00000434342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
SEMA3F-206ENST00000434342 SOGA1O94964 1423 aa18.72■□□□□ 0.59
SEMA3F-206ENST00000434342 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
SEMA3F-206ENST00000434342 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
SEMA3F-206ENST00000434342 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
SEMA3F-206ENST00000434342 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
SEMA3F-206ENST00000434342 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
SEMA3F-206ENST00000434342 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
SEMA3F-206ENST00000434342 PRKCSHP14314 528 aaPredicted RBP18.6■□□□□ 0.57
SEMA3F-206ENST00000434342 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
SEMA3F-206ENST00000434342 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
SEMA3F-206ENST00000434342 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
SEMA3F-206ENST00000434342 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
SEMA3F-206ENST00000434342 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.56
SEMA3F-206ENST00000434342 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
SEMA3F-206ENST00000434342 EEA1Q15075 1411 aa18.46■□□□□ 0.55
SEMA3F-206ENST00000434342 ATAD2BQ9ULI0 1458 aa18.42■□□□□ 0.54
SEMA3F-206ENST00000434342 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
SEMA3F-206ENST00000434342 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
SEMA3F-206ENST00000434342 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
SEMA3F-206ENST00000434342 APLP2Q06481 763 aa18.34■□□□□ 0.53
SEMA3F-206ENST00000434342 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
SEMA3F-206ENST00000434342 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
SEMA3F-206ENST00000434342 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
SEMA3F-206ENST00000434342 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
SEMA3F-206ENST00000434342 CLIP1P30622 1438 aa18.28■□□□□ 0.52
SEMA3F-206ENST00000434342 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
SEMA3F-206ENST00000434342 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
SEMA3F-206ENST00000434342 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
SEMA3F-206ENST00000434342 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
SEMA3F-206ENST00000434342 KIF21BO75037 1637 aa18.09■□□□□ 0.49
SEMA3F-206ENST00000434342 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
SEMA3F-206ENST00000434342 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
SEMA3F-206ENST00000434342 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
SEMA3F-206ENST00000434342 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
SEMA3F-206ENST00000434342 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
SEMA3F-206ENST00000434342 ITGAEP38570 1179 aa17.95■□□□□ 0.46
SEMA3F-206ENST00000434342 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
SEMA3F-206ENST00000434342 CUX1P39880 1505 aa17.94■□□□□ 0.46
SEMA3F-206ENST00000434342 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
SEMA3F-206ENST00000434342 CFTRP13569 1480 aa17.89■□□□□ 0.45
SEMA3F-206ENST00000434342 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
SEMA3F-206ENST00000434342 MIER1Q8N108 512 aa17.87■□□□□ 0.45
SEMA3F-206ENST00000434342 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
SEMA3F-206ENST00000434342 ARAP1Q96P48 1450 aa17.86■□□□□ 0.45
SEMA3F-206ENST00000434342 ATP1B4Q9UN42 357 aaPredicted RBP17.85■□□□□ 0.45
SEMA3F-206ENST00000434342 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
SEMA3F-206ENST00000434342 CUX2O14529 1486 aa17.83■□□□□ 0.44
SEMA3F-206ENST00000434342 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
SEMA3F-206ENST00000434342 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
SEMA3F-206ENST00000434342 IGF1RP08069 1367 aa17.79■□□□□ 0.44
SEMA3F-206ENST00000434342 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
SEMA3F-206ENST00000434342 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
SEMA3F-206ENST00000434342 DHX57Q6P158 1386 aaKnown RBP17.74■□□□□ 0.43
SEMA3F-206ENST00000434342 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
SEMA3F-206ENST00000434342 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
SEMA3F-206ENST00000434342 FAM50AQ14320 339 aaKnown RBP17.69■□□□□ 0.42
SEMA3F-206ENST00000434342 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
SEMA3F-206ENST00000434342 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms