RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 PELP1Q8IZL8 1130 aaKnown RBP20.63■□□□□ 0.89
NPHS1-202ENST00000378910 MYT1Q01538 1121 aa20.51■□□□□ 0.87
NPHS1-202ENST00000378910 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
NPHS1-202ENST00000378910 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
NPHS1-202ENST00000378910 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
NPHS1-202ENST00000378910 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
NPHS1-202ENST00000378910 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
NPHS1-202ENST00000378910 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
NPHS1-202ENST00000378910 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
NPHS1-202ENST00000378910 HRCP23327 699 aa18.52■□□□□ 0.56
NPHS1-202ENST00000378910 CENPBP07199 599 aaPredicted RBP18.46■□□□□ 0.55
NPHS1-202ENST00000378910 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
NPHS1-202ENST00000378910 BCL11AQ9H165 835 aa18.21■□□□□ 0.51
NPHS1-202ENST00000378910 PRKCSHP14314 528 aaPredicted RBP18.21■□□□□ 0.51
NPHS1-202ENST00000378910 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
NPHS1-202ENST00000378910 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
NPHS1-202ENST00000378910 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
NPHS1-202ENST00000378910 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
NPHS1-202ENST00000378910 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
NPHS1-202ENST00000378910 TRIM26Q12899 539 aaPredicted RBP17.93■□□□□ 0.46
NPHS1-202ENST00000378910 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
NPHS1-202ENST00000378910 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
NPHS1-202ENST00000378910 GTF3C3Q9Y5Q9 886 aa17.81■□□□□ 0.44
NPHS1-202ENST00000378910 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
NPHS1-202ENST00000378910 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
NPHS1-202ENST00000378910 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
NPHS1-202ENST00000378910 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
NPHS1-202ENST00000378910 APLP2Q06481 763 aa17.6■□□□□ 0.41
NPHS1-202ENST00000378910 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
NPHS1-202ENST00000378910 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
NPHS1-202ENST00000378910 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
NPHS1-202ENST00000378910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
NPHS1-202ENST00000378910 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
NPHS1-202ENST00000378910 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
NPHS1-202ENST00000378910 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
NPHS1-202ENST00000378910 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
NPHS1-202ENST00000378910 NEFLP07196 543 aa17.16■□□□□ 0.34
NPHS1-202ENST00000378910 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
NPHS1-202ENST00000378910 GLIPR1L2Q4G1C9 344 aa17.11■□□□□ 0.33
NPHS1-202ENST00000378910 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
NPHS1-202ENST00000378910 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
NPHS1-202ENST00000378910 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.31
NPHS1-202ENST00000378910 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
NPHS1-202ENST00000378910 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
NPHS1-202ENST00000378910 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
NPHS1-202ENST00000378910 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
NPHS1-202ENST00000378910 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
NPHS1-202ENST00000378910 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
NPHS1-202ENST00000378910 PKNOX2Q96KN3 472 aa16.8■□□□□ 0.28
NPHS1-202ENST00000378910 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
NPHS1-202ENST00000378910 ITGAEP38570 1179 aa16.78■□□□□ 0.28
NPHS1-202ENST00000378910 BCANQ96GW7 911 aa16.72■□□□□ 0.27
NPHS1-202ENST00000378910 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
NPHS1-202ENST00000378910 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
NPHS1-202ENST00000378910 UBE2Q2Q8WVN8 375 aa16.65■□□□□ 0.26
NPHS1-202ENST00000378910 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
NPHS1-202ENST00000378910 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
NPHS1-202ENST00000378910 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
NPHS1-202ENST00000378910 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
NPHS1-202ENST00000378910 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.24
NPHS1-202ENST00000378910 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
NPHS1-202ENST00000378910 MIER1Q8N108 512 aa16.52■□□□□ 0.23
NPHS1-202ENST00000378910 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
NPHS1-202ENST00000378910 NBR1Q14596 966 aa16.47■□□□□ 0.23
NPHS1-202ENST00000378910 A0A0U1RQG5 324 aaPredicted RBP16.46■□□□□ 0.23
NPHS1-202ENST00000378910 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
NPHS1-202ENST00000378910 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
NPHS1-202ENST00000378910 ANP32CO43423 234 aa16.39■□□□□ 0.22
NPHS1-202ENST00000378910 FKBP8Q14318 412 aa16.39■□□□□ 0.21
NPHS1-202ENST00000378910 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
NPHS1-202ENST00000378910 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
NPHS1-202ENST00000378910 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
NPHS1-202ENST00000378910 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.21
NPHS1-202ENST00000378910 PDE4CQ08493 712 aa16.31■□□□□ 0.2
NPHS1-202ENST00000378910 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
NPHS1-202ENST00000378910 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
NPHS1-202ENST00000378910 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.18
NPHS1-202ENST00000378910 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
NPHS1-202ENST00000378910 ABCC9O60706 1549 aa16.18■□□□□ 0.18
NPHS1-202ENST00000378910 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
NPHS1-202ENST00000378910 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
NPHS1-202ENST00000378910 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
NPHS1-202ENST00000378910 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
NPHS1-202ENST00000378910 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
NPHS1-202ENST00000378910 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
NPHS1-202ENST00000378910 HNRNPUQ00839 825 aaKnown RBP eCLIP16.09■□□□□ 0.17
NPHS1-202ENST00000378910 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
NPHS1-202ENST00000378910 NEFMP07197 916 aa16.02■□□□□ 0.16
NPHS1-202ENST00000378910 RSPH6AQ9H0K4 717 aa16.02■□□□□ 0.15
NPHS1-202ENST00000378910 ZBTB47Q9UFB7 747 aaPredicted RBP16.01■□□□□ 0.15
NPHS1-202ENST00000378910 CLIP1P30622 1438 aa16.01■□□□□ 0.15
NPHS1-202ENST00000378910 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
NPHS1-202ENST00000378910 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
NPHS1-202ENST00000378910 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
NPHS1-202ENST00000378910 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
NPHS1-202ENST00000378910 ZMYND15Q9H091 742 aa15.96■□□□□ 0.14
NPHS1-202ENST00000378910 NAP1L5Q96NT1 182 aaPredicted RBP15.95■□□□□ 0.14
NPHS1-202ENST00000378910 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
NPHS1-202ENST00000378910 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
NPHS1-202ENST00000378910 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms