RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
SMCR5-201ENST00000543475 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
SMCR5-201ENST00000543475 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
SMCR5-201ENST00000543475 HRCP23327 699 aa21.04■□□□□ 0.96
SMCR5-201ENST00000543475 MYO15BQ96JP2 1530 aa20.81■□□□□ 0.92
SMCR5-201ENST00000543475 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
SMCR5-201ENST00000543475 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
SMCR5-201ENST00000543475 ZCCHC6Q5VYS8 1495 aaKnown RBP20.72■□□□□ 0.91
SMCR5-201ENST00000543475 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
SMCR5-201ENST00000543475 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
SMCR5-201ENST00000543475 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
SMCR5-201ENST00000543475 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
SMCR5-201ENST00000543475 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
SMCR5-201ENST00000543475 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
SMCR5-201ENST00000543475 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
SMCR5-201ENST00000543475 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
SMCR5-201ENST00000543475 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
SMCR5-201ENST00000543475 ABCC9O60706 1549 aa19.67■□□□□ 0.74
SMCR5-201ENST00000543475 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
SMCR5-201ENST00000543475 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
SMCR5-201ENST00000543475 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
SMCR5-201ENST00000543475 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
SMCR5-201ENST00000543475 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
SMCR5-201ENST00000543475 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
SMCR5-201ENST00000543475 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
SMCR5-201ENST00000543475 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
SMCR5-201ENST00000543475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
SMCR5-201ENST00000543475 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
SMCR5-201ENST00000543475 CENPBP07199 599 aaPredicted RBP19.21■□□□□ 0.67
SMCR5-201ENST00000543475 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
SMCR5-201ENST00000543475 GTF3C3Q9Y5Q9 886 aa19.19■□□□□ 0.66
SMCR5-201ENST00000543475 MYT1Q01538 1121 aa19.15■□□□□ 0.66
SMCR5-201ENST00000543475 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
SMCR5-201ENST00000543475 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.63
SMCR5-201ENST00000543475 WIZO95785 1651 aa18.97■□□□□ 0.63
SMCR5-201ENST00000543475 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
SMCR5-201ENST00000543475 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
SMCR5-201ENST00000543475 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
SMCR5-201ENST00000543475 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
SMCR5-201ENST00000543475 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
SMCR5-201ENST00000543475 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
SMCR5-201ENST00000543475 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
SMCR5-201ENST00000543475 NACADO15069 1562 aa18.81■□□□□ 0.6
SMCR5-201ENST00000543475 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
SMCR5-201ENST00000543475 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
SMCR5-201ENST00000543475 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
SMCR5-201ENST00000543475 MIER1Q8N108 512 aa18.69■□□□□ 0.58
SMCR5-201ENST00000543475 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
SMCR5-201ENST00000543475 SOGA1O94964 1423 aa18.67■□□□□ 0.58
SMCR5-201ENST00000543475 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
SMCR5-201ENST00000543475 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
SMCR5-201ENST00000543475 EEA1Q15075 1411 aa18.62■□□□□ 0.57
SMCR5-201ENST00000543475 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.57
SMCR5-201ENST00000543475 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
SMCR5-201ENST00000543475 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
SMCR5-201ENST00000543475 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
SMCR5-201ENST00000543475 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
SMCR5-201ENST00000543475 APLP2Q06481 763 aa18.39■□□□□ 0.53
SMCR5-201ENST00000543475 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
SMCR5-201ENST00000543475 CLIP1P30622 1438 aa18.38■□□□□ 0.53
SMCR5-201ENST00000543475 CLSPNQ9HAW4 1339 aa18.38■□□□□ 0.53
SMCR5-201ENST00000543475 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
SMCR5-201ENST00000543475 KIF21BO75037 1637 aa18.34■□□□□ 0.53
SMCR5-201ENST00000543475 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
SMCR5-201ENST00000543475 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
SMCR5-201ENST00000543475 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
SMCR5-201ENST00000543475 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
SMCR5-201ENST00000543475 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
SMCR5-201ENST00000543475 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
SMCR5-201ENST00000543475 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
SMCR5-201ENST00000543475 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
SMCR5-201ENST00000543475 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
SMCR5-201ENST00000543475 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
SMCR5-201ENST00000543475 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.47
SMCR5-201ENST00000543475 PRKCSHP14314 528 aaPredicted RBP18.01■□□□□ 0.47
SMCR5-201ENST00000543475 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
SMCR5-201ENST00000543475 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
SMCR5-201ENST00000543475 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
SMCR5-201ENST00000543475 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMCR5-201ENST00000543475 BCANQ96GW7 911 aa17.96■□□□□ 0.47
SMCR5-201ENST00000543475 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
SMCR5-201ENST00000543475 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
SMCR5-201ENST00000543475 CUX2O14529 1486 aa17.94■□□□□ 0.46
SMCR5-201ENST00000543475 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
SMCR5-201ENST00000543475 FKBP8Q14318 412 aa17.91■□□□□ 0.46
SMCR5-201ENST00000543475 ITGAEP38570 1179 aa17.91■□□□□ 0.46
SMCR5-201ENST00000543475 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
SMCR5-201ENST00000543475 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
SMCR5-201ENST00000543475 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
SMCR5-201ENST00000543475 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
SMCR5-201ENST00000543475 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
SMCR5-201ENST00000543475 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.45
SMCR5-201ENST00000543475 NEFLP07196 543 aa17.83■□□□□ 0.45
SMCR5-201ENST00000543475 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.45
SMCR5-201ENST00000543475 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
SMCR5-201ENST00000543475 RBM19Q9Y4C8 960 aaKnown RBP17.78■□□□□ 0.44
SMCR5-201ENST00000543475 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
SMCR5-201ENST00000543475 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
SMCR5-201ENST00000543475 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
SMCR5-201ENST00000543475 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms