RNA–Protein interactions for RNA: ENST00000419880.7

UBE2W-201, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best) BASIC

Gene UBE2W, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-201ENST00000419880 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
UBE2W-201ENST00000419880 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
UBE2W-201ENST00000419880 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
UBE2W-201ENST00000419880 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
UBE2W-201ENST00000419880 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
UBE2W-201ENST00000419880 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
UBE2W-201ENST00000419880 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
UBE2W-201ENST00000419880 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
UBE2W-201ENST00000419880 MYO15BQ96JP2 1530 aa22.95■■□□□ 1.26
UBE2W-201ENST00000419880 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
UBE2W-201ENST00000419880 ABCC9O60706 1549 aa22.87■■□□□ 1.25
UBE2W-201ENST00000419880 NACADO15069 1562 aa22.7■■□□□ 1.22
UBE2W-201ENST00000419880 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
UBE2W-201ENST00000419880 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
UBE2W-201ENST00000419880 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
UBE2W-201ENST00000419880 LOC105371045A0A1W2PR82 267 aa22.35■■□□□ 1.17
UBE2W-201ENST00000419880 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
UBE2W-201ENST00000419880 WIZO95785 1651 aa22.17■■□□□ 1.14
UBE2W-201ENST00000419880 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
UBE2W-201ENST00000419880 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
UBE2W-201ENST00000419880 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
UBE2W-201ENST00000419880 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
UBE2W-201ENST00000419880 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
UBE2W-201ENST00000419880 HRCP23327 699 aa21.95■■□□□ 1.1
UBE2W-201ENST00000419880 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
UBE2W-201ENST00000419880 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
UBE2W-201ENST00000419880 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
UBE2W-201ENST00000419880 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
UBE2W-201ENST00000419880 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
UBE2W-201ENST00000419880 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
UBE2W-201ENST00000419880 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
UBE2W-201ENST00000419880 TRIM26Q12899 539 aaPredicted RBP21.72■■□□□ 1.07
UBE2W-201ENST00000419880 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
UBE2W-201ENST00000419880 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
UBE2W-201ENST00000419880 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
UBE2W-201ENST00000419880 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
UBE2W-201ENST00000419880 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
UBE2W-201ENST00000419880 SOGA1O94964 1423 aa21.39■■□□□ 1.01
UBE2W-201ENST00000419880 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
UBE2W-201ENST00000419880 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
UBE2W-201ENST00000419880 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
UBE2W-201ENST00000419880 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
UBE2W-201ENST00000419880 EEA1Q15075 1411 aa21.22■□□□□ 0.99
UBE2W-201ENST00000419880 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
UBE2W-201ENST00000419880 SYNJ1O43426 1573 aa21.18■□□□□ 0.98
UBE2W-201ENST00000419880 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
UBE2W-201ENST00000419880 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
UBE2W-201ENST00000419880 ZEB1P37275 1124 aaPredicted RBP21.12■□□□□ 0.97
UBE2W-201ENST00000419880 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
UBE2W-201ENST00000419880 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
UBE2W-201ENST00000419880 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
UBE2W-201ENST00000419880 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
UBE2W-201ENST00000419880 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
UBE2W-201ENST00000419880 KIF21BO75037 1637 aa20.93■□□□□ 0.94
UBE2W-201ENST00000419880 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
UBE2W-201ENST00000419880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
UBE2W-201ENST00000419880 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
UBE2W-201ENST00000419880 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
UBE2W-201ENST00000419880 CLIP1P30622 1438 aa20.83■□□□□ 0.92
UBE2W-201ENST00000419880 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
UBE2W-201ENST00000419880 CFTRP13569 1480 aa20.8■□□□□ 0.92
UBE2W-201ENST00000419880 CUX1P39880 1505 aa20.79■□□□□ 0.92
UBE2W-201ENST00000419880 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
UBE2W-201ENST00000419880 VPS8Q8N3P4 1428 aa20.71■□□□□ 0.91
UBE2W-201ENST00000419880 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
UBE2W-201ENST00000419880 KIF27Q86VH2 1401 aa20.64■□□□□ 0.89
UBE2W-201ENST00000419880 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.89
UBE2W-201ENST00000419880 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
UBE2W-201ENST00000419880 APLP2Q06481 763 aa20.6■□□□□ 0.89
UBE2W-201ENST00000419880 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
UBE2W-201ENST00000419880 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
UBE2W-201ENST00000419880 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
UBE2W-201ENST00000419880 ARAP1Q96P48 1450 aa20.52■□□□□ 0.88
UBE2W-201ENST00000419880 CUX2O14529 1486 aa20.49■□□□□ 0.87
UBE2W-201ENST00000419880 IGF1RP08069 1367 aa20.46■□□□□ 0.87
UBE2W-201ENST00000419880 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
UBE2W-201ENST00000419880 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
UBE2W-201ENST00000419880 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
UBE2W-201ENST00000419880 ARHGAP35Q9NRY4 1499 aa20.38■□□□□ 0.85
UBE2W-201ENST00000419880 CARMIL1Q5VZK9 1371 aa20.36■□□□□ 0.85
UBE2W-201ENST00000419880 NESP48681 1621 aa20.33■□□□□ 0.85
UBE2W-201ENST00000419880 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
UBE2W-201ENST00000419880 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
UBE2W-201ENST00000419880 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
UBE2W-201ENST00000419880 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
UBE2W-201ENST00000419880 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
UBE2W-201ENST00000419880 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
UBE2W-201ENST00000419880 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
UBE2W-201ENST00000419880 RRBP1Q9P2E9 1410 aaKnown RBP20.2■□□□□ 0.82
UBE2W-201ENST00000419880 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
UBE2W-201ENST00000419880 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
UBE2W-201ENST00000419880 CCNB3Q8WWL7 1395 aa20.13■□□□□ 0.81
UBE2W-201ENST00000419880 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
UBE2W-201ENST00000419880 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
UBE2W-201ENST00000419880 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
UBE2W-201ENST00000419880 TIAM1Q13009 1591 aa20.1■□□□□ 0.81
UBE2W-201ENST00000419880 ITGAEP38570 1179 aa20.09■□□□□ 0.81
UBE2W-201ENST00000419880 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.8
UBE2W-201ENST00000419880 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
UBE2W-201ENST00000419880 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms