RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
GFRA1-204ENST00000439649 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
GFRA1-204ENST00000439649 MYT1Q01538 1121 aa19.28■□□□□ 0.68
GFRA1-204ENST00000439649 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
GFRA1-204ENST00000439649 APLP2Q06481 763 aa19.04■□□□□ 0.64
GFRA1-204ENST00000439649 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
GFRA1-204ENST00000439649 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
GFRA1-204ENST00000439649 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
GFRA1-204ENST00000439649 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
GFRA1-204ENST00000439649 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
GFRA1-204ENST00000439649 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.59
GFRA1-204ENST00000439649 NEFLP07196 543 aa18.54■□□□□ 0.56
GFRA1-204ENST00000439649 YTHDC1Q96MU7 727 aaKnown RBP18.54■□□□□ 0.56
GFRA1-204ENST00000439649 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
GFRA1-204ENST00000439649 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
GFRA1-204ENST00000439649 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
GFRA1-204ENST00000439649 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
GFRA1-204ENST00000439649 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
GFRA1-204ENST00000439649 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
GFRA1-204ENST00000439649 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
GFRA1-204ENST00000439649 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
GFRA1-204ENST00000439649 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
GFRA1-204ENST00000439649 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
GFRA1-204ENST00000439649 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
GFRA1-204ENST00000439649 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
GFRA1-204ENST00000439649 CLSPNQ9HAW4 1339 aa17.43■□□□□ 0.38
GFRA1-204ENST00000439649 HRCP23327 699 aa17.43■□□□□ 0.38
GFRA1-204ENST00000439649 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
GFRA1-204ENST00000439649 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
GFRA1-204ENST00000439649 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
GFRA1-204ENST00000439649 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
GFRA1-204ENST00000439649 MYT1LQ9UL68 1186 aa17.16■□□□□ 0.34
GFRA1-204ENST00000439649 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
GFRA1-204ENST00000439649 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
GFRA1-204ENST00000439649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
GFRA1-204ENST00000439649 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
GFRA1-204ENST00000439649 ANP32AP39687 249 aaKnown RBP17.04■□□□□ 0.32
GFRA1-204ENST00000439649 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
GFRA1-204ENST00000439649 ITGAEP38570 1179 aa17.02■□□□□ 0.32
GFRA1-204ENST00000439649 NEFMP07197 916 aa16.99■□□□□ 0.31
GFRA1-204ENST00000439649 ANP32CO43423 234 aa16.98■□□□□ 0.31
GFRA1-204ENST00000439649 CANXP27824 592 aaKnown RBP16.92■□□□□ 0.3
GFRA1-204ENST00000439649 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
GFRA1-204ENST00000439649 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
GFRA1-204ENST00000439649 HSP90AA1P07900 732 aaKnown RBP16.79■□□□□ 0.28
GFRA1-204ENST00000439649 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.27
GFRA1-204ENST00000439649 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
GFRA1-204ENST00000439649 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
GFRA1-204ENST00000439649 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
GFRA1-204ENST00000439649 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
GFRA1-204ENST00000439649 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
GFRA1-204ENST00000439649 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
GFRA1-204ENST00000439649 BCANQ96GW7 911 aa16.6■□□□□ 0.25
GFRA1-204ENST00000439649 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
GFRA1-204ENST00000439649 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
GFRA1-204ENST00000439649 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
GFRA1-204ENST00000439649 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
GFRA1-204ENST00000439649 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
GFRA1-204ENST00000439649 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.23
GFRA1-204ENST00000439649 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.23
GFRA1-204ENST00000439649 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
GFRA1-204ENST00000439649 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
GFRA1-204ENST00000439649 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
GFRA1-204ENST00000439649 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
GFRA1-204ENST00000439649 BECN1Q14457 450 aa16.39■□□□□ 0.21
GFRA1-204ENST00000439649 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
GFRA1-204ENST00000439649 GOLGA6L22H0YM25 854 aa16.36■□□□□ 0.21
GFRA1-204ENST00000439649 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
GFRA1-204ENST00000439649 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
GFRA1-204ENST00000439649 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
GFRA1-204ENST00000439649 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
GFRA1-204ENST00000439649 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
GFRA1-204ENST00000439649 NCLP19338 710 aaKnown RBP16.27■□□□□ 0.2
GFRA1-204ENST00000439649 FKBP8Q14318 412 aa16.25■□□□□ 0.19
GFRA1-204ENST00000439649 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
GFRA1-204ENST00000439649 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
GFRA1-204ENST00000439649 ERICH6BQ5W0A0 696 aa16.24■□□□□ 0.19
GFRA1-204ENST00000439649 ZRSR1Q15695 479 aaKnown RBP16.23■□□□□ 0.19
GFRA1-204ENST00000439649 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
GFRA1-204ENST00000439649 CASC1Q6TDU7 716 aa16.18■□□□□ 0.18
GFRA1-204ENST00000439649 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
GFRA1-204ENST00000439649 NBR1Q14596 966 aa16.17■□□□□ 0.18
GFRA1-204ENST00000439649 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
GFRA1-204ENST00000439649 NRDCO43847 1150 aa16.16■□□□□ 0.18
GFRA1-204ENST00000439649 PTMAP06454 111 aaKnown RBP16.08■□□□□ 0.16
GFRA1-204ENST00000439649 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
GFRA1-204ENST00000439649 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
GFRA1-204ENST00000439649 CHMP4BQ9H444 224 aaKnown RBP16.07■□□□□ 0.16
GFRA1-204ENST00000439649 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
GFRA1-204ENST00000439649 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
GFRA1-204ENST00000439649 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
GFRA1-204ENST00000439649 FBLN2P98095 1184 aa16.02■□□□□ 0.16
GFRA1-204ENST00000439649 DNTTIP2Q5QJE6 756 aaKnown RBP16.02■□□□□ 0.16
GFRA1-204ENST00000439649 MRS2Q9HD23 443 aa16.02■□□□□ 0.16
GFRA1-204ENST00000439649 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.16
GFRA1-204ENST00000439649 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
GFRA1-204ENST00000439649 ARXQ96QS3 562 aa16.01■□□□□ 0.15
GFRA1-204ENST00000439649 CDCA8Q53HL2 280 aa15.98■□□□□ 0.15
GFRA1-204ENST00000439649 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
GFRA1-204ENST00000439649 CFAP44Q96MT7 982 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms