RNA–Protein interactions for RNA: ENST00000402255.5

APOBEC3A-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOBEC3A, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-202ENST00000402255 NISCHQ9Y2I1 1504 aa37.22■■■■□ 3.55
APOBEC3A-202ENST00000402255 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
APOBEC3A-202ENST00000402255 ABCC9O60706 1549 aa32.15■■■□□ 2.74
APOBEC3A-202ENST00000402255 RB1CC1Q8TDY2 1594 aa31.07■■■□□ 2.56
APOBEC3A-202ENST00000402255 NACADO15069 1562 aa31.06■■■□□ 2.56
APOBEC3A-202ENST00000402255 ZCCHC6Q5VYS8 1495 aaKnown RBP31.05■■■□□ 2.56
APOBEC3A-202ENST00000402255 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
APOBEC3A-202ENST00000402255 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
APOBEC3A-202ENST00000402255 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
APOBEC3A-202ENST00000402255 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
APOBEC3A-202ENST00000402255 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
APOBEC3A-202ENST00000402255 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
APOBEC3A-202ENST00000402255 PABPN1Q86U42 306 aaKnown RBP eCLIP30.02■■■□□ 2.4
APOBEC3A-202ENST00000402255 SHROOM4Q9ULL8 1493 aa29.84■■■□□ 2.37
APOBEC3A-202ENST00000402255 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
APOBEC3A-202ENST00000402255 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
APOBEC3A-202ENST00000402255 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
APOBEC3A-202ENST00000402255 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
APOBEC3A-202ENST00000402255 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
APOBEC3A-202ENST00000402255 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
APOBEC3A-202ENST00000402255 SMARCA4P51532 1647 aa28.89■■■□□ 2.21
APOBEC3A-202ENST00000402255 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
APOBEC3A-202ENST00000402255 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
APOBEC3A-202ENST00000402255 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.18
APOBEC3A-202ENST00000402255 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
APOBEC3A-202ENST00000402255 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
APOBEC3A-202ENST00000402255 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
APOBEC3A-202ENST00000402255 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
APOBEC3A-202ENST00000402255 WIZO95785 1651 aa28.4■■■□□ 2.14
APOBEC3A-202ENST00000402255 RSF1Q96T23 1441 aaPredicted RBP28.38■■■□□ 2.13
APOBEC3A-202ENST00000402255 TOP2AP11388 1531 aaKnown RBP28.12■■■□□ 2.09
APOBEC3A-202ENST00000402255 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
APOBEC3A-202ENST00000402255 NESP48681 1621 aa27.85■■■□□ 2.05
APOBEC3A-202ENST00000402255 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.04
APOBEC3A-202ENST00000402255 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
APOBEC3A-202ENST00000402255 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
APOBEC3A-202ENST00000402255 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
APOBEC3A-202ENST00000402255 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
APOBEC3A-202ENST00000402255 CFTRP13569 1480 aa27.65■■■□□ 2.02
APOBEC3A-202ENST00000402255 KIF21AQ7Z4S6 1674 aa27.61■■■□□ 2.01
APOBEC3A-202ENST00000402255 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
APOBEC3A-202ENST00000402255 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
APOBEC3A-202ENST00000402255 CEP164Q9UPV0 1460 aa27.47■■□□□ 1.99
APOBEC3A-202ENST00000402255 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
APOBEC3A-202ENST00000402255 CUX2O14529 1486 aa27.41■■□□□ 1.98
APOBEC3A-202ENST00000402255 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
APOBEC3A-202ENST00000402255 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
APOBEC3A-202ENST00000402255 WDR62O43379 1518 aa27.29■■□□□ 1.96
APOBEC3A-202ENST00000402255 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
APOBEC3A-202ENST00000402255 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
APOBEC3A-202ENST00000402255 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
APOBEC3A-202ENST00000402255 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
APOBEC3A-202ENST00000402255 CUX1P39880 1505 aa26.9■■□□□ 1.9
APOBEC3A-202ENST00000402255 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
APOBEC3A-202ENST00000402255 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
APOBEC3A-202ENST00000402255 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
APOBEC3A-202ENST00000402255 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
APOBEC3A-202ENST00000402255 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
APOBEC3A-202ENST00000402255 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
APOBEC3A-202ENST00000402255 TOP2BQ02880 1626 aa26.74■■□□□ 1.87
APOBEC3A-202ENST00000402255 SYNJ1O43426 1573 aa26.72■■□□□ 1.87
APOBEC3A-202ENST00000402255 SOGA1O94964 1423 aa26.71■■□□□ 1.87
APOBEC3A-202ENST00000402255 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
APOBEC3A-202ENST00000402255 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
APOBEC3A-202ENST00000402255 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
APOBEC3A-202ENST00000402255 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
APOBEC3A-202ENST00000402255 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
APOBEC3A-202ENST00000402255 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.84
APOBEC3A-202ENST00000402255 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
APOBEC3A-202ENST00000402255 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
APOBEC3A-202ENST00000402255 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
APOBEC3A-202ENST00000402255 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
APOBEC3A-202ENST00000402255 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
APOBEC3A-202ENST00000402255 SNAPC4Q5SXM2 1469 aa26.35■■□□□ 1.81
APOBEC3A-202ENST00000402255 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
APOBEC3A-202ENST00000402255 CHD1O14646 1710 aa26.31■■□□□ 1.8
APOBEC3A-202ENST00000402255 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
APOBEC3A-202ENST00000402255 ERICH3Q5RHP9 1530 aa26.26■■□□□ 1.79
APOBEC3A-202ENST00000402255 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
APOBEC3A-202ENST00000402255 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
APOBEC3A-202ENST00000402255 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
APOBEC3A-202ENST00000402255 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
APOBEC3A-202ENST00000402255 FBLN2P98095 1184 aa26.22■■□□□ 1.79
APOBEC3A-202ENST00000402255 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
APOBEC3A-202ENST00000402255 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
APOBEC3A-202ENST00000402255 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
APOBEC3A-202ENST00000402255 CUL7Q14999 1698 aa26.1■■□□□ 1.77
APOBEC3A-202ENST00000402255 GRIN2AQ12879 1464 aa26.08■■□□□ 1.77
APOBEC3A-202ENST00000402255 IGF1RP08069 1367 aa26.03■■□□□ 1.76
APOBEC3A-202ENST00000402255 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
APOBEC3A-202ENST00000402255 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
APOBEC3A-202ENST00000402255 NUP160Q12769 1436 aa25.93■■□□□ 1.74
APOBEC3A-202ENST00000402255 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
APOBEC3A-202ENST00000402255 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
APOBEC3A-202ENST00000402255 EEA1Q15075 1411 aa25.86■■□□□ 1.73
APOBEC3A-202ENST00000402255 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
APOBEC3A-202ENST00000402255 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
APOBEC3A-202ENST00000402255 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
APOBEC3A-202ENST00000402255 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
APOBEC3A-202ENST00000402255 RAPGEF2Q9Y4G8 1499 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms