RNA–Protein interactions for RNA: ENST00000298119.8

LRFN5-201, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRFN5, Length 3,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-201ENST00000298119 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
LRFN5-201ENST00000298119 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
LRFN5-201ENST00000298119 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
LRFN5-201ENST00000298119 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
LRFN5-201ENST00000298119 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
LRFN5-201ENST00000298119 PCGF6Q9BYE7 350 aa21.29■■□□□ 1
LRFN5-201ENST00000298119 FAM9AQ8IZU1 332 aaPredicted RBP20.93■□□□□ 0.94
LRFN5-201ENST00000298119 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
LRFN5-201ENST00000298119 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
LRFN5-201ENST00000298119 LOC105371045A0A1W2PR82 267 aa20.74■□□□□ 0.91
LRFN5-201ENST00000298119 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
LRFN5-201ENST00000298119 HRCP23327 699 aa20.54■□□□□ 0.88
LRFN5-201ENST00000298119 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
LRFN5-201ENST00000298119 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
LRFN5-201ENST00000298119 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
LRFN5-201ENST00000298119 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
LRFN5-201ENST00000298119 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
LRFN5-201ENST00000298119 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
LRFN5-201ENST00000298119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
LRFN5-201ENST00000298119 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
LRFN5-201ENST00000298119 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.74
LRFN5-201ENST00000298119 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
LRFN5-201ENST00000298119 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
LRFN5-201ENST00000298119 CENPBP07199 599 aaPredicted RBP19.45■□□□□ 0.7
LRFN5-201ENST00000298119 APLP2Q06481 763 aa19.44■□□□□ 0.7
LRFN5-201ENST00000298119 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
LRFN5-201ENST00000298119 GTF3C3Q9Y5Q9 886 aa19.35■□□□□ 0.69
LRFN5-201ENST00000298119 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
LRFN5-201ENST00000298119 ITGAEP38570 1179 aa19.3■□□□□ 0.68
LRFN5-201ENST00000298119 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
LRFN5-201ENST00000298119 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
LRFN5-201ENST00000298119 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
LRFN5-201ENST00000298119 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
LRFN5-201ENST00000298119 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
LRFN5-201ENST00000298119 ABCC9O60706 1549 aa19.06■□□□□ 0.64
LRFN5-201ENST00000298119 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
LRFN5-201ENST00000298119 MYT1Q01538 1121 aa18.96■□□□□ 0.63
LRFN5-201ENST00000298119 BCANQ96GW7 911 aa18.94■□□□□ 0.62
LRFN5-201ENST00000298119 CNGB1Q14028 1251 aaPredicted RBP18.92■□□□□ 0.62
LRFN5-201ENST00000298119 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
LRFN5-201ENST00000298119 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
LRFN5-201ENST00000298119 MIER1Q8N108 512 aa18.79■□□□□ 0.6
LRFN5-201ENST00000298119 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
LRFN5-201ENST00000298119 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
LRFN5-201ENST00000298119 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
LRFN5-201ENST00000298119 P3H3Q8IVL6 736 aa18.58■□□□□ 0.56
LRFN5-201ENST00000298119 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
LRFN5-201ENST00000298119 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
LRFN5-201ENST00000298119 NEFLP07196 543 aa18.54■□□□□ 0.56
LRFN5-201ENST00000298119 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
LRFN5-201ENST00000298119 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
LRFN5-201ENST00000298119 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
LRFN5-201ENST00000298119 RB1CC1Q8TDY2 1594 aa18.45■□□□□ 0.54
LRFN5-201ENST00000298119 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
LRFN5-201ENST00000298119 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
LRFN5-201ENST00000298119 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
LRFN5-201ENST00000298119 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
LRFN5-201ENST00000298119 SOGA1O94964 1423 aa18.36■□□□□ 0.53
LRFN5-201ENST00000298119 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
LRFN5-201ENST00000298119 FKBP8Q14318 412 aa18.33■□□□□ 0.53
LRFN5-201ENST00000298119 IRX6P78412 446 aaPredicted RBP18.3■□□□□ 0.52
LRFN5-201ENST00000298119 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
LRFN5-201ENST00000298119 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
LRFN5-201ENST00000298119 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
LRFN5-201ENST00000298119 KCNH8Q96L42 1107 aa18.2■□□□□ 0.5
LRFN5-201ENST00000298119 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
LRFN5-201ENST00000298119 CLIP1P30622 1438 aa18.15■□□□□ 0.5
LRFN5-201ENST00000298119 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.5
LRFN5-201ENST00000298119 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
LRFN5-201ENST00000298119 ANP32CO43423 234 aa18.11■□□□□ 0.49
LRFN5-201ENST00000298119 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
LRFN5-201ENST00000298119 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
LRFN5-201ENST00000298119 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
LRFN5-201ENST00000298119 HNRNPUQ00839 825 aaKnown RBP eCLIP18.03■□□□□ 0.48
LRFN5-201ENST00000298119 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.47
LRFN5-201ENST00000298119 WIZO95785 1651 aa18.01■□□□□ 0.47
LRFN5-201ENST00000298119 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
LRFN5-201ENST00000298119 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
LRFN5-201ENST00000298119 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
LRFN5-201ENST00000298119 GOLGA3Q08378 1498 aa17.91■□□□□ 0.46
LRFN5-201ENST00000298119 CDK11AQ9UQ88 783 aaPredicted RBP17.87■□□□□ 0.45
LRFN5-201ENST00000298119 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
LRFN5-201ENST00000298119 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
LRFN5-201ENST00000298119 NBR1Q14596 966 aa17.83■□□□□ 0.45
LRFN5-201ENST00000298119 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
LRFN5-201ENST00000298119 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
LRFN5-201ENST00000298119 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
LRFN5-201ENST00000298119 ZNF777Q9ULD5 760 aaPredicted RBP17.78■□□□□ 0.44
LRFN5-201ENST00000298119 FBLN2P98095 1184 aa17.75■□□□□ 0.43
LRFN5-201ENST00000298119 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
LRFN5-201ENST00000298119 FOXD1Q16676 465 aa17.71■□□□□ 0.43
LRFN5-201ENST00000298119 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
LRFN5-201ENST00000298119 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
LRFN5-201ENST00000298119 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
LRFN5-201ENST00000298119 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
LRFN5-201ENST00000298119 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
LRFN5-201ENST00000298119 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
LRFN5-201ENST00000298119 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
LRFN5-201ENST00000298119 EEA1Q15075 1411 aa17.63■□□□□ 0.41
LRFN5-201ENST00000298119 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms