Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 SNX5-217ENST00000606557 1087 ntBASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA7Q9Y5G6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA7Q9Y5G6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 AC142381.2-201ENST00000566120 298 ntBASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA7Q9Y5G6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA7Q9Y5G6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGA7Q9Y5G6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.2■■□□□ 1.15
PCDHGA7Q9Y5G6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHGA7Q9Y5G6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHGA7Q9Y5G6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 ZNRF2P3-201ENST00000424200 374 ntBASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 AC090877.2-201ENST00000558441 1738 ntBASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGA7Q9Y5G6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 RARRES2P6-201ENST00000567333 442 ntBASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA7Q9Y5G6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 UNC93B3-201ENST00000308076 687 ntBASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 AL117328.2-201ENST00000624617 1940 ntBASIC22.18■■□□□ 1.14
PCDHGA7Q9Y5G6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 SUDS3P1-201ENST00000505831 966 ntBASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 AL031432.3-201ENST00000607698 485 ntBASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms