RNA–Protein interactions for RNA: ENST00000283921.4

HOXA10-201, Transcript of homeobox A10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HOXA10, Length 2,541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-201ENST00000283921 NISCHQ9Y2I1 1504 aa44.17■■■■■ 4.66
HOXA10-201ENST00000283921 SHROOM4Q9ULL8 1493 aa37.78■■■■□ 3.64
HOXA10-201ENST00000283921 ZCCHC6Q5VYS8 1495 aaKnown RBP37.49■■■■□ 3.59
HOXA10-201ENST00000283921 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
HOXA10-201ENST00000283921 SUPT5HO00267 1087 aaKnown RBP37.33■■■■□ 3.57
HOXA10-201ENST00000283921 HRCP23327 699 aa36.66■■■■□ 3.46
HOXA10-201ENST00000283921 CHIC1Q5VXU3 224 aa36.63■■■■□ 3.45
HOXA10-201ENST00000283921 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
HOXA10-201ENST00000283921 DCAF1Q9Y4B6 1507 aa36.37■■■■□ 3.41
HOXA10-201ENST00000283921 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
HOXA10-201ENST00000283921 PCGF6Q9BYE7 350 aa35.94■■■■□ 3.34
HOXA10-201ENST00000283921 PPARGC1BQ86YN6 1023 aaKnown RBP35.53■■■■□ 3.28
HOXA10-201ENST00000283921 ABCC9O60706 1549 aa35.49■■■■□ 3.27
HOXA10-201ENST00000283921 LOC105371045A0A1W2PR82 267 aa35.44■■■■□ 3.26
HOXA10-201ENST00000283921 TRIM26Q12899 539 aaPredicted RBP35.3■■■■□ 3.24
HOXA10-201ENST00000283921 RSF1Q96T23 1441 aaPredicted RBP35.1■■■■□ 3.21
HOXA10-201ENST00000283921 SCRIBQ14160 1630 aa35■■■■□ 3.19
HOXA10-201ENST00000283921 ZEB1P37275 1124 aaPredicted RBP34.95■■■■□ 3.19
HOXA10-201ENST00000283921 PELP1Q8IZL8 1130 aaKnown RBP34.95■■■■□ 3.19
HOXA10-201ENST00000283921 RB1CC1Q8TDY2 1594 aa34.9■■■■□ 3.18
HOXA10-201ENST00000283921 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
HOXA10-201ENST00000283921 NACADO15069 1562 aa34.48■■■■□ 3.11
HOXA10-201ENST00000283921 FAM9AQ8IZU1 332 aaPredicted RBP34.42■■■■□ 3.1
HOXA10-201ENST00000283921 CECR2Q9BXF3 1484 aa34.3■■■■□ 3.08
HOXA10-201ENST00000283921 MROH2BQ7Z745 1585 aa34.29■■■■□ 3.08
HOXA10-201ENST00000283921 SCAF1Q9H7N4 1312 aaKnown RBP34.24■■■■□ 3.07
HOXA10-201ENST00000283921 WIZO95785 1651 aa34.15■■■■□ 3.06
HOXA10-201ENST00000283921 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
HOXA10-201ENST00000283921 EHMT2Q96KQ7 1210 aa33.99■■■■□ 3.03
HOXA10-201ENST00000283921 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
HOXA10-201ENST00000283921 ACIN1Q9UKV3 1341 aaKnown RBP33.73■■■□□ 2.99
HOXA10-201ENST00000283921 TOP2AP11388 1531 aaKnown RBP33.71■■■□□ 2.99
HOXA10-201ENST00000283921 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
HOXA10-201ENST00000283921 CCER1Q8TC90 406 aaPredicted RBP33.68■■■□□ 2.98
HOXA10-201ENST00000283921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.62■■■□□ 2.97
HOXA10-201ENST00000283921 MYT1Q01538 1121 aa33.58■■■□□ 2.97
HOXA10-201ENST00000283921 SMARCA4P51532 1647 aa33.55■■■□□ 2.96
HOXA10-201ENST00000283921 ABCC8Q09428 1581 aa33.52■■■□□ 2.96
HOXA10-201ENST00000283921 CCDC88BA6NC98 1476 aa33.5■■■□□ 2.95
HOXA10-201ENST00000283921 SMARCA2P51531 1590 aa33.5■■■□□ 2.95
HOXA10-201ENST00000283921 NEUROD1Q13562 356 aa33.49■■■□□ 2.95
HOXA10-201ENST00000283921 CENPBP07199 599 aaPredicted RBP33.48■■■□□ 2.95
HOXA10-201ENST00000283921 CEP162Q5TB80 1403 aa33.47■■■□□ 2.95
HOXA10-201ENST00000283921 EEA1Q15075 1411 aa33.46■■■□□ 2.95
HOXA10-201ENST00000283921 TNIKQ9UKE5 1360 aa33.44■■■□□ 2.94
HOXA10-201ENST00000283921 DIEXFQ68CQ4 756 aaKnown RBP33.38■■■□□ 2.93
HOXA10-201ENST00000283921 SOGA1O94964 1423 aa33.29■■■□□ 2.92
HOXA10-201ENST00000283921 GTF3C3Q9Y5Q9 886 aa33.29■■■□□ 2.92
HOXA10-201ENST00000283921 UNC13AQ9UPW8 1703 aa33.24■■■□□ 2.91
HOXA10-201ENST00000283921 CSRNP3Q8WYN3 585 aa33.23■■■□□ 2.91
HOXA10-201ENST00000283921 GOLGA3Q08378 1498 aa33.17■■■□□ 2.9
HOXA10-201ENST00000283921 UBTFP17480 764 aaKnown RBP33.1■■■□□ 2.89
HOXA10-201ENST00000283921 TTBK1Q5TCY1 1321 aaPredicted RBP33.08■■■□□ 2.89
HOXA10-201ENST00000283921 RUSC2Q8N2Y8 1516 aa33.07■■■□□ 2.88
HOXA10-201ENST00000283921 ZNF316A6NFI3 1004 aaPredicted RBP32.97■■■□□ 2.87
HOXA10-201ENST00000283921 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.87
HOXA10-201ENST00000283921 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
HOXA10-201ENST00000283921 KIF21BO75037 1637 aa32.94■■■□□ 2.86
HOXA10-201ENST00000283921 SYNJ1O43426 1573 aa32.78■■■□□ 2.84
HOXA10-201ENST00000283921 CLIP1P30622 1438 aa32.76■■■□□ 2.83
HOXA10-201ENST00000283921 BAZ1BQ9UIG0 1483 aaKnown RBP32.76■■■□□ 2.83
HOXA10-201ENST00000283921 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
HOXA10-201ENST00000283921 VPS8Q8N3P4 1428 aa32.72■■■□□ 2.83
HOXA10-201ENST00000283921 HNRNPUL2Q1KMD3 747 aaKnown RBP32.6■■■□□ 2.81
HOXA10-201ENST00000283921 APLP2Q06481 763 aa32.58■■■□□ 2.81
HOXA10-201ENST00000283921 PABPN1Q86U42 306 aaKnown RBP eCLIP32.55■■■□□ 2.8
HOXA10-201ENST00000283921 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
HOXA10-201ENST00000283921 RAPGEF2Q9Y4G8 1499 aa32.5■■■□□ 2.79
HOXA10-201ENST00000283921 YTHDC1Q96MU7 727 aaKnown RBP32.48■■■□□ 2.79
HOXA10-201ENST00000283921 MIER1Q8N108 512 aa32.47■■■□□ 2.79
HOXA10-201ENST00000283921 TOP2BQ02880 1626 aa32.42■■■□□ 2.78
HOXA10-201ENST00000283921 CLSPNQ9HAW4 1339 aa32.39■■■□□ 2.78
HOXA10-201ENST00000283921 ERICH3Q5RHP9 1530 aa32.33■■■□□ 2.77
HOXA10-201ENST00000283921 BIVM-ERCC5R4GMW8 1640 aa32.31■■■□□ 2.76
HOXA10-201ENST00000283921 PRXQ9BXM0 1461 aa32.21■■■□□ 2.75
HOXA10-201ENST00000283921 DHX57Q6P158 1386 aaKnown RBP32.16■■■□□ 2.74
HOXA10-201ENST00000283921 ARAP1Q96P48 1450 aa32.15■■■□□ 2.74
HOXA10-201ENST00000283921 RANGAP1P46060 587 aaPredicted RBP32.13■■■□□ 2.73
HOXA10-201ENST00000283921 RRBP1Q9P2E9 1410 aaKnown RBP32.05■■■□□ 2.72
HOXA10-201ENST00000283921 CUX2O14529 1486 aa31.99■■■□□ 2.71
HOXA10-201ENST00000283921 KIF27Q86VH2 1401 aa31.96■■■□□ 2.71
HOXA10-201ENST00000283921 HMGXB3Q12766 1538 aa31.94■■■□□ 2.7
HOXA10-201ENST00000283921 KANK4Q5T7N3 995 aaPredicted RBP31.93■■■□□ 2.7
HOXA10-201ENST00000283921 CUX1P39880 1505 aa31.91■■■□□ 2.7
HOXA10-201ENST00000283921 SUPT16HQ9Y5B9 1047 aaKnown RBP31.88■■■□□ 2.69
HOXA10-201ENST00000283921 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
HOXA10-201ENST00000283921 CCNB3Q8WWL7 1395 aa31.85■■■□□ 2.69
HOXA10-201ENST00000283921 ARHGAP35Q9NRY4 1499 aa31.79■■■□□ 2.68
HOXA10-201ENST00000283921 CFTRP13569 1480 aa31.73■■■□□ 2.67
HOXA10-201ENST00000283921 MAP3K1Q13233 1512 aa31.7■■■□□ 2.66
HOXA10-201ENST00000283921 PRDM2Q13029 1718 aa31.62■■■□□ 2.65
HOXA10-201ENST00000283921 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
HOXA10-201ENST00000283921 TSHZ2Q9NRE2 1034 aa31.59■■■□□ 2.65
HOXA10-201ENST00000283921 RAB3GAP2Q9H2M9 1393 aa31.58■■■□□ 2.65
HOXA10-201ENST00000283921 MAPKBP1O60336 1514 aa31.55■■■□□ 2.64
HOXA10-201ENST00000283921 ANP32EQ9BTT0 268 aa31.53■■■□□ 2.64
HOXA10-201ENST00000283921 ITGAEP38570 1179 aa31.5■■■□□ 2.63
HOXA10-201ENST00000283921 SETD5Q9C0A6 1442 aa31.49■■■□□ 2.63
HOXA10-201ENST00000283921 IGF1RP08069 1367 aa31.49■■■□□ 2.63
HOXA10-201ENST00000283921 LRRC9Q6ZRR7 1453 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms