RNA–Protein interactions for RNA: ENST00000528192.5

NDUFS3-206, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 5 BASIC

Gene NDUFS3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-206ENST00000528192 NISCHQ9Y2I1 1504 aa55.42■■■■■ 6.46
NDUFS3-206ENST00000528192 CCDC180Q9P1Z9 1646 aa49.65■■■■■ 5.54
NDUFS3-206ENST00000528192 ABCC9O60706 1549 aa49.27■■■■■ 5.48
NDUFS3-206ENST00000528192 RB1CC1Q8TDY2 1594 aa47.09■■■■■ 5.13
NDUFS3-206ENST00000528192 NACADO15069 1562 aa46.84■■■■■ 5.09
NDUFS3-206ENST00000528192 DCAF8L2P0C7V8 631 aa46.65■■■■■ 5.06
NDUFS3-206ENST00000528192 MYO15BQ96JP2 1530 aa46.29■■■■■ 5
NDUFS3-206ENST00000528192 UNC13AQ9UPW8 1703 aa46.02■■■■■ 4.96
NDUFS3-206ENST00000528192 ZCCHC6Q5VYS8 1495 aaKnown RBP46■■■■■ 4.95
NDUFS3-206ENST00000528192 PABPN1Q86U42 306 aaKnown RBP eCLIP45.9■■■■■ 4.94
NDUFS3-206ENST00000528192 DNAJC5BQ9UF47 199 aa45.86■■■■■ 4.93
NDUFS3-206ENST00000528192 DCAF1Q9Y4B6 1507 aa45.82■■■■■ 4.93
NDUFS3-206ENST00000528192 BICRAQ9NZM4 1560 aa45.65■■■■■ 4.9
NDUFS3-206ENST00000528192 SCRIBQ14160 1630 aa45.23■■■■■ 4.83
NDUFS3-206ENST00000528192 SHROOM4Q9ULL8 1493 aa45.13■■■■■ 4.82
NDUFS3-206ENST00000528192 CC2D2AQ9P2K1 1620 aa44.54■■■■■ 4.72
NDUFS3-206ENST00000528192 EIF4G1Q04637 1599 aaKnown RBP44.52■■■■■ 4.72
NDUFS3-206ENST00000528192 CECR2Q9BXF3 1484 aa44.35■■■■■ 4.69
NDUFS3-206ENST00000528192 NCAPD3P42695 1498 aa43.2■■■■■ 4.51
NDUFS3-206ENST00000528192 SMARCA4P51532 1647 aa43.19■■■■■ 4.5
NDUFS3-206ENST00000528192 ATAD2BQ9ULI0 1458 aa43.12■■■■■ 4.49
NDUFS3-206ENST00000528192 SMARCA2P51531 1590 aa43.06■■■■■ 4.48
NDUFS3-206ENST00000528192 BAZ1AQ9NRL2 1556 aaPredicted RBP43.03■■■■■ 4.48
NDUFS3-206ENST00000528192 HMGXB3Q12766 1538 aa42.94■■■■■ 4.46
NDUFS3-206ENST00000528192 PEG3Q9GZU2 1588 aa42.76■■■■■ 4.44
NDUFS3-206ENST00000528192 BAZ1BQ9UIG0 1483 aaKnown RBP42.75■■■■■ 4.43
NDUFS3-206ENST00000528192 MROH2BQ7Z745 1585 aa42.69■■■■■ 4.43
NDUFS3-206ENST00000528192 ERCC6Q03468 1493 aa42.56■■■■■ 4.4
NDUFS3-206ENST00000528192 NESP48681 1621 aa42.4■■■■■ 4.38
NDUFS3-206ENST00000528192 CUX2O14529 1486 aa42.36■■■■■ 4.37
NDUFS3-206ENST00000528192 WIZO95785 1651 aa42.22■■■■■ 4.35
NDUFS3-206ENST00000528192 LAMC3Q9Y6N6 1575 aa42.22■■■■■ 4.35
NDUFS3-206ENST00000528192 PDS5BQ9NTI5 1447 aa41.96■■■■■ 4.31
NDUFS3-206ENST00000528192 THOC2Q8NI27 1593 aaKnown RBP41.94■■■■■ 4.3
NDUFS3-206ENST00000528192 RSF1Q96T23 1441 aaPredicted RBP41.93■■■■■ 4.3
NDUFS3-206ENST00000528192 DNAJC5Q9H3Z4 198 aa41.92■■■■■ 4.3
NDUFS3-206ENST00000528192 CADPSQ9ULU8 1353 aa41.91■■■■■ 4.3
NDUFS3-206ENST00000528192 KIF21AQ7Z4S6 1674 aa41.91■■■■■ 4.3
NDUFS3-206ENST00000528192 TOP2AP11388 1531 aaKnown RBP41.72■■■■■ 4.27
NDUFS3-206ENST00000528192 MRC2Q9UBG0 1479 aa41.57■■■■■ 4.25
NDUFS3-206ENST00000528192 CFTRP13569 1480 aa41.5■■■■■ 4.23
NDUFS3-206ENST00000528192 CEP164Q9UPV0 1460 aa41.48■■■■■ 4.23
NDUFS3-206ENST00000528192 WDR62O43379 1518 aa41.45■■■■■ 4.23
NDUFS3-206ENST00000528192 FANCD2Q9BXW9 1451 aa41.45■■■■■ 4.23
NDUFS3-206ENST00000528192 CCDC88BA6NC98 1476 aa41.22■■■■■ 4.19
NDUFS3-206ENST00000528192 PRDM2Q13029 1718 aa41.19■■■■■ 4.18
NDUFS3-206ENST00000528192 URB2Q14146 1524 aaKnown RBP41.06■■■■■ 4.16
NDUFS3-206ENST00000528192 TOPBP1Q92547 1522 aa40.69■■■■■ 4.1
NDUFS3-206ENST00000528192 ABCC8Q09428 1581 aa40.67■■■■■ 4.1
NDUFS3-206ENST00000528192 IFT140Q96RY7 1462 aa40.63■■■■■ 4.09
NDUFS3-206ENST00000528192 DNMBPQ6XZF7 1577 aa40.6■■■■■ 4.09
NDUFS3-206ENST00000528192 ZNF608Q9ULD9 1512 aaPredicted RBP40.49■■■■■ 4.07
NDUFS3-206ENST00000528192 OSCARQ8IYS5 282 aa40.47■■■■■ 4.07
NDUFS3-206ENST00000528192 EIF4G3O43432 1585 aaKnown RBP40.33■■■■■ 4.05
NDUFS3-206ENST00000528192 SUPT5HO00267 1087 aaKnown RBP40.33■■■■■ 4.05
NDUFS3-206ENST00000528192 TARBP1Q13395 1621 aaKnown RBP40.31■■■■■ 4.04
NDUFS3-206ENST00000528192 POLA1P09884 1462 aaPredicted RBP40.29■■■■■ 4.04
NDUFS3-206ENST00000528192 TRIM41Q8WV44 630 aa40.24■■■■■ 4.03
NDUFS3-206ENST00000528192 AQRO60306 1485 aaKnown RBP eCLIP40.18■■■■■ 4.025e-6■■□□□ 14.3
NDUFS3-206ENST00000528192 SOGA1O94964 1423 aa40.13■■■■■ 4.01
NDUFS3-206ENST00000528192 RAD54L2Q9Y4B4 1467 aa40.13■■■■■ 4.01
NDUFS3-206ENST00000528192 CUX1P39880 1505 aa40.11■■■■■ 4.01
NDUFS3-206ENST00000528192 FGD5Q6ZNL6 1462 aa40.09■■■■■ 4.01
NDUFS3-206ENST00000528192 CHD1O14646 1710 aa39.99■■■■□ 3.99
NDUFS3-206ENST00000528192 TDRD9Q8NDG6 1382 aaKnown RBP39.98■■■■□ 3.99
NDUFS3-206ENST00000528192 WDR97A6NE52 1622 aa39.98■■■■□ 3.99
NDUFS3-206ENST00000528192 RIMBP3CA6NJZ7 1639 aa39.91■■■■□ 3.98
NDUFS3-206ENST00000528192 RIMBP3BA6NNM3 1639 aa39.91■■■■□ 3.98
NDUFS3-206ENST00000528192 RIMBP3Q9UFD9 1639 aa39.91■■■■□ 3.98
NDUFS3-206ENST00000528192 FBLN2P98095 1184 aa39.88■■■■□ 3.97
NDUFS3-206ENST00000528192 ARHGEF11O15085 1522 aa39.81■■■■□ 3.96
NDUFS3-206ENST00000528192 SNAPC4Q5SXM2 1469 aa39.8■■■■□ 3.96
NDUFS3-206ENST00000528192 GRIN2BQ13224 1484 aa39.75■■■■□ 3.95
NDUFS3-206ENST00000528192 MAGI1Q96QZ7 1491 aaPredicted RBP39.73■■■■□ 3.95
NDUFS3-206ENST00000528192 ABCA10Q8WWZ4 1543 aa39.66■■■■□ 3.94
NDUFS3-206ENST00000528192 GAPVD1Q14C86 1478 aa39.65■■■■□ 3.94
NDUFS3-206ENST00000528192 PBRM1Q86U86 1689 aa39.64■■■■□ 3.94
NDUFS3-206ENST00000528192 CHMP7Q8WUX9 453 aaPredicted RBP39.64■■■■□ 3.94
NDUFS3-206ENST00000528192 WRNQ14191 1432 aaPredicted RBP eCLIP39.59■■■■□ 3.93
NDUFS3-206ENST00000528192 ABCA5Q8WWZ7 1642 aa39.58■■■■□ 3.93
NDUFS3-206ENST00000528192 BIVM-ERCC5R4GMW8 1640 aa39.58■■■■□ 3.93
NDUFS3-206ENST00000528192 SYNJ2O15056 1496 aa39.58■■■■□ 3.93
NDUFS3-206ENST00000528192 TOP2BQ02880 1626 aa39.58■■■■□ 3.93
NDUFS3-206ENST00000528192 SYNJ1O43426 1573 aa39.55■■■■□ 3.92
NDUFS3-206ENST00000528192 CLASP1Q7Z460 1538 aa39.5■■■■□ 3.91
NDUFS3-206ENST00000528192 CYB5RLQ6IPT4 315 aa39.49■■■■□ 3.91
NDUFS3-206ENST00000528192 ARAP1Q96P48 1450 aa39.43■■■■□ 3.9
NDUFS3-206ENST00000528192 ADAMTS12P58397 1594 aa39.26■■■■□ 3.88
NDUFS3-206ENST00000528192 GRIN2AQ12879 1464 aa39.24■■■■□ 3.87
NDUFS3-206ENST00000528192 ERICH3Q5RHP9 1530 aa39.19■■■■□ 3.86
NDUFS3-206ENST00000528192 FHAD1B1AJZ9 1412 aa39.16■■■■□ 3.86
NDUFS3-206ENST00000528192 CEP170Q5SW79 1584 aa39.08■■■■□ 3.85
NDUFS3-206ENST00000528192 NUP160Q12769 1436 aa39.07■■■■□ 3.85
NDUFS3-206ENST00000528192 TRHP20396 242 aaPredicted RBP38.97■■■■□ 3.83
NDUFS3-206ENST00000528192 ERCC6L2Q5T890 1561 aa38.89■■■■□ 3.82
NDUFS3-206ENST00000528192 SHROOM2Q13796 1616 aa38.89■■■■□ 3.82
NDUFS3-206ENST00000528192 KIF27Q86VH2 1401 aa38.82■■■■□ 3.81
NDUFS3-206ENST00000528192 IGF1RP08069 1367 aa38.72■■■■□ 3.79
NDUFS3-206ENST00000528192 CUL7Q14999 1698 aa38.71■■■■□ 3.79
NDUFS3-206ENST00000528192 RUSC2Q8N2Y8 1516 aa38.7■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms