RNA–Protein interactions for RNA: ENST00000373618.1

DENND1A-201, Transcript of DENN domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene DENND1A, Length 3,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-201ENST00000373618 NISCHQ9Y2I1 1504 aa43.18■■■■■ 4.5
DENND1A-201ENST00000373618 SHROOM4Q9ULL8 1493 aa38.28■■■■□ 3.72
DENND1A-201ENST00000373618 SUPT5HO00267 1087 aaKnown RBP37.86■■■■□ 3.65
DENND1A-201ENST00000373618 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
DENND1A-201ENST00000373618 MYO15BQ96JP2 1530 aa36.68■■■■□ 3.46
DENND1A-201ENST00000373618 CHIC1Q5VXU3 224 aa36.68■■■■□ 3.46
DENND1A-201ENST00000373618 HRCP23327 699 aa36.6■■■■□ 3.45
DENND1A-201ENST00000373618 PCGF6Q9BYE7 350 aa36.56■■■■□ 3.44
DENND1A-201ENST00000373618 ZCCHC6Q5VYS8 1495 aaKnown RBP36.54■■■■□ 3.44
DENND1A-201ENST00000373618 PPARGC1BQ86YN6 1023 aaKnown RBP36.27■■■■□ 3.4
DENND1A-201ENST00000373618 LOC105371045A0A1W2PR82 267 aa36.03■■■■□ 3.36
DENND1A-201ENST00000373618 CCDC180Q9P1Z9 1646 aa35.91■■■■□ 3.34
DENND1A-201ENST00000373618 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
DENND1A-201ENST00000373618 TRIM26Q12899 539 aaPredicted RBP35.29■■■■□ 3.24
DENND1A-201ENST00000373618 EHMT2Q96KQ7 1210 aa35.19■■■■□ 3.22
DENND1A-201ENST00000373618 FAM9AQ8IZU1 332 aaPredicted RBP35.13■■■■□ 3.21
DENND1A-201ENST00000373618 TRIM41Q8WV44 630 aa34.91■■■■□ 3.18
DENND1A-201ENST00000373618 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
DENND1A-201ENST00000373618 ZEB1P37275 1124 aaPredicted RBP34.57■■■■□ 3.12
DENND1A-201ENST00000373618 ABCC9O60706 1549 aa34.55■■■■□ 3.12
DENND1A-201ENST00000373618 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
DENND1A-201ENST00000373618 RB1CC1Q8TDY2 1594 aa34.37■■■■□ 3.09
DENND1A-201ENST00000373618 SCAF1Q9H7N4 1312 aaKnown RBP34.33■■■■□ 3.09
DENND1A-201ENST00000373618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.18■■■■□ 3.06
DENND1A-201ENST00000373618 TTBK1Q5TCY1 1321 aaPredicted RBP34.13■■■■□ 3.05
DENND1A-201ENST00000373618 CECR2Q9BXF3 1484 aa34.02■■■■□ 3.04
DENND1A-201ENST00000373618 CCER1Q8TC90 406 aaPredicted RBP34.01■■■■□ 3.03
DENND1A-201ENST00000373618 PELP1Q8IZL8 1130 aaKnown RBP33.84■■■■□ 3.01
DENND1A-201ENST00000373618 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
DENND1A-201ENST00000373618 NEUROD1Q13562 356 aa33.72■■■□□ 2.99
DENND1A-201ENST00000373618 WIZO95785 1651 aa33.67■■■□□ 2.98
DENND1A-201ENST00000373618 ACIN1Q9UKV3 1341 aaKnown RBP33.63■■■□□ 2.97
DENND1A-201ENST00000373618 DIEXFQ68CQ4 756 aaKnown RBP33.59■■■□□ 2.97
DENND1A-201ENST00000373618 GTF3C3Q9Y5Q9 886 aa33.49■■■□□ 2.95
DENND1A-201ENST00000373618 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
DENND1A-201ENST00000373618 UBTFP17480 764 aaKnown RBP33.31■■■□□ 2.92
DENND1A-201ENST00000373618 CENPBP07199 599 aaPredicted RBP33.3■■■□□ 2.92
DENND1A-201ENST00000373618 CCDC88BA6NC98 1476 aa33.3■■■□□ 2.92
DENND1A-201ENST00000373618 NACADO15069 1562 aa33.28■■■□□ 2.92
DENND1A-201ENST00000373618 YTHDC1Q96MU7 727 aaKnown RBP33.27■■■□□ 2.92
DENND1A-201ENST00000373618 SOGA1O94964 1423 aa33.21■■■□□ 2.91
DENND1A-201ENST00000373618 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
DENND1A-201ENST00000373618 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
DENND1A-201ENST00000373618 HNRNPUL2Q1KMD3 747 aaKnown RBP33.08■■■□□ 2.89
DENND1A-201ENST00000373618 EIF4G1Q04637 1599 aaKnown RBP33.06■■■□□ 2.88
DENND1A-201ENST00000373618 RUSC2Q8N2Y8 1516 aa33.05■■■□□ 2.88
DENND1A-201ENST00000373618 CSRNP3Q8WYN3 585 aa33.05■■■□□ 2.88
DENND1A-201ENST00000373618 ZNF316A6NFI3 1004 aaPredicted RBP33.04■■■□□ 2.88
DENND1A-201ENST00000373618 RANGAP1P46060 587 aaPredicted RBP32.99■■■□□ 2.87
DENND1A-201ENST00000373618 WRNQ14191 1432 aaPredicted RBP eCLIP32.98■■■□□ 2.87
DENND1A-201ENST00000373618 TNIKQ9UKE5 1360 aa32.94■■■□□ 2.86
DENND1A-201ENST00000373618 MIER1Q8N108 512 aa32.87■■■□□ 2.85
DENND1A-201ENST00000373618 TOP2AP11388 1531 aaKnown RBP32.84■■■□□ 2.85
DENND1A-201ENST00000373618 SMARCA2P51531 1590 aa32.79■■■□□ 2.84
DENND1A-201ENST00000373618 PABPN1Q86U42 306 aaKnown RBP eCLIP32.75■■■□□ 2.83
DENND1A-201ENST00000373618 SMARCA4P51532 1647 aa32.7■■■□□ 2.83
DENND1A-201ENST00000373618 GOLGA3Q08378 1498 aa32.63■■■□□ 2.81
DENND1A-201ENST00000373618 APLP2Q06481 763 aa32.58■■■□□ 2.81
DENND1A-201ENST00000373618 EEA1Q15075 1411 aa32.56■■■□□ 2.8
DENND1A-201ENST00000373618 CLIP1P30622 1438 aa32.47■■■□□ 2.79
DENND1A-201ENST00000373618 CEP164Q9UPV0 1460 aa32.33■■■□□ 2.77
DENND1A-201ENST00000373618 SYNJ1O43426 1573 aa32.27■■■□□ 2.76
DENND1A-201ENST00000373618 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
DENND1A-201ENST00000373618 RAPGEF2Q9Y4G8 1499 aa32.26■■■□□ 2.75
DENND1A-201ENST00000373618 VPS8Q8N3P4 1428 aa32.26■■■□□ 2.75
DENND1A-201ENST00000373618 MYT1Q01538 1121 aa32.13■■■□□ 2.73
DENND1A-201ENST00000373618 ITGAEP38570 1179 aa32.12■■■□□ 2.73
DENND1A-201ENST00000373618 KANK4Q5T7N3 995 aaPredicted RBP32.1■■■□□ 2.73
DENND1A-201ENST00000373618 KIF21BO75037 1637 aa32.07■■■□□ 2.72
DENND1A-201ENST00000373618 DHX57Q6P158 1386 aaKnown RBP32■■■□□ 2.71
DENND1A-201ENST00000373618 SUPT16HQ9Y5B9 1047 aaKnown RBP31.94■■■□□ 2.7
DENND1A-201ENST00000373618 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
DENND1A-201ENST00000373618 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
DENND1A-201ENST00000373618 KCNH8Q96L42 1107 aa31.86■■■□□ 2.69
DENND1A-201ENST00000373618 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
DENND1A-201ENST00000373618 ARAP1Q96P48 1450 aa31.73■■■□□ 2.67
DENND1A-201ENST00000373618 CLSPNQ9HAW4 1339 aa31.73■■■□□ 2.67
DENND1A-201ENST00000373618 BCANQ96GW7 911 aa31.73■■■□□ 2.67
DENND1A-201ENST00000373618 PEG3Q9GZU2 1588 aa31.72■■■□□ 2.67
DENND1A-201ENST00000373618 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
DENND1A-201ENST00000373618 TSHZ2Q9NRE2 1034 aa31.59■■■□□ 2.65
DENND1A-201ENST00000373618 PRXQ9BXM0 1461 aa31.58■■■□□ 2.65
DENND1A-201ENST00000373618 CCNB3Q8WWL7 1395 aa31.58■■■□□ 2.65
DENND1A-201ENST00000373618 HIRIP3Q9BW71 556 aaPredicted RBP31.57■■■□□ 2.64
DENND1A-201ENST00000373618 DDX10Q13206 875 aaKnown RBP31.55■■■□□ 2.64
DENND1A-201ENST00000373618 SIN3AQ96ST3 1273 aa31.52■■■□□ 2.64
DENND1A-201ENST00000373618 ATP1B4Q9UN42 357 aaPredicted RBP31.51■■■□□ 2.64
DENND1A-201ENST00000373618 RRBP1Q9P2E9 1410 aaKnown RBP31.5■■■□□ 2.63
DENND1A-201ENST00000373618 RAB3GAP2Q9H2M9 1393 aa31.47■■■□□ 2.63
DENND1A-201ENST00000373618 FAM50AQ14320 339 aaKnown RBP31.46■■■□□ 2.63
DENND1A-201ENST00000373618 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
DENND1A-201ENST00000373618 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
DENND1A-201ENST00000373618 FKBP8Q14318 412 aa31.42■■■□□ 2.62
DENND1A-201ENST00000373618 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
DENND1A-201ENST00000373618 ARHGAP35Q9NRY4 1499 aa31.39■■■□□ 2.62
DENND1A-201ENST00000373618 CUX1P39880 1505 aa31.37■■■□□ 2.61
DENND1A-201ENST00000373618 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
DENND1A-201ENST00000373618 TRIM52Q96A61 297 aa31.32■■■□□ 2.6
DENND1A-201ENST00000373618 MAPKBP1O60336 1514 aa31.24■■■□□ 2.59
DENND1A-201ENST00000373618 CUX2O14529 1486 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms