RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 NISCHQ9Y2I1 1504 aa50.78■■■■■ 5.72
TTC39A-203ENST00000371747 CCDC180Q9P1Z9 1646 aa44.19■■■■■ 4.67
TTC39A-203ENST00000371747 ZCCHC6Q5VYS8 1495 aaKnown RBP42.72■■■■■ 4.43
TTC39A-203ENST00000371747 ABCC9O60706 1549 aa42.04■■■■■ 4.32
TTC39A-203ENST00000371747 DCAF8L2P0C7V8 631 aa41.96■■■■■ 4.31
TTC39A-203ENST00000371747 DCAF1Q9Y4B6 1507 aa41.94■■■■■ 4.3
TTC39A-203ENST00000371747 SHROOM4Q9ULL8 1493 aa41.77■■■■■ 4.28
TTC39A-203ENST00000371747 MYO15BQ96JP2 1530 aa41.41■■■■■ 4.22
TTC39A-203ENST00000371747 NACADO15069 1562 aa41.23■■■■■ 4.19
TTC39A-203ENST00000371747 RB1CC1Q8TDY2 1594 aa40.91■■■■■ 4.14
TTC39A-203ENST00000371747 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
TTC39A-203ENST00000371747 SUPT5HO00267 1087 aaKnown RBP40.36■■■■■ 4.05
TTC39A-203ENST00000371747 UNC13AQ9UPW8 1703 aa40.18■■■■■ 4.02
TTC39A-203ENST00000371747 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
TTC39A-203ENST00000371747 PABPN1Q86U42 306 aaKnown RBP eCLIP39.66■■■■□ 3.94
TTC39A-203ENST00000371747 RSF1Q96T23 1441 aaPredicted RBP39.56■■■■□ 3.92
TTC39A-203ENST00000371747 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
TTC39A-203ENST00000371747 MROH2BQ7Z745 1585 aa39.28■■■■□ 3.88
TTC39A-203ENST00000371747 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
TTC39A-203ENST00000371747 WIZO95785 1651 aa38.98■■■■□ 3.83
TTC39A-203ENST00000371747 SMARCA4P51532 1647 aa38.96■■■■□ 3.83
TTC39A-203ENST00000371747 CHIC1Q5VXU3 224 aa38.8■■■■□ 3.8
TTC39A-203ENST00000371747 EIF4G1Q04637 1599 aaKnown RBP38.54■■■■□ 3.76
TTC39A-203ENST00000371747 TOP2AP11388 1531 aaKnown RBP38.53■■■■□ 3.76
TTC39A-203ENST00000371747 PEG3Q9GZU2 1588 aa38.49■■■■□ 3.75
TTC39A-203ENST00000371747 ATAD2BQ9ULI0 1458 aa38.39■■■■□ 3.74
TTC39A-203ENST00000371747 SMARCA2P51531 1590 aa38.31■■■■□ 3.72
TTC39A-203ENST00000371747 CCDC88BA6NC98 1476 aa38.2■■■■□ 3.7
TTC39A-203ENST00000371747 BAZ1BQ9UIG0 1483 aaKnown RBP38.12■■■■□ 3.69
TTC39A-203ENST00000371747 NCAPD3P42695 1498 aa38.09■■■■□ 3.69
TTC39A-203ENST00000371747 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
TTC39A-203ENST00000371747 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
TTC39A-203ENST00000371747 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
TTC39A-203ENST00000371747 ABCC8Q09428 1581 aa37.52■■■■□ 3.6
TTC39A-203ENST00000371747 LOC105371045A0A1W2PR82 267 aa37.37■■■■□ 3.57
TTC39A-203ENST00000371747 DNAJC5BQ9UF47 199 aa37.37■■■■□ 3.57
TTC39A-203ENST00000371747 FAM9AQ8IZU1 332 aaPredicted RBP37.26■■■■□ 3.55
TTC39A-203ENST00000371747 WRNQ14191 1432 aaPredicted RBP eCLIP37.21■■■■□ 3.55
TTC39A-203ENST00000371747 CFTRP13569 1480 aa37.19■■■■□ 3.54
TTC39A-203ENST00000371747 CADPSQ9ULU8 1353 aa37.11■■■■□ 3.53
TTC39A-203ENST00000371747 SYNJ1O43426 1573 aa37.05■■■■□ 3.52
TTC39A-203ENST00000371747 PRDM2Q13029 1718 aa36.96■■■■□ 3.51
TTC39A-203ENST00000371747 SOGA1O94964 1423 aa36.9■■■■□ 3.5
TTC39A-203ENST00000371747 NESP48681 1621 aa36.88■■■■□ 3.49
TTC39A-203ENST00000371747 TOP2BQ02880 1626 aa36.85■■■■□ 3.49
TTC39A-203ENST00000371747 EEA1Q15075 1411 aa36.82■■■■□ 3.48
TTC39A-203ENST00000371747 BIVM-ERCC5R4GMW8 1640 aa36.79■■■■□ 3.48
TTC39A-203ENST00000371747 LAMC3Q9Y6N6 1575 aa36.79■■■■□ 3.48
TTC39A-203ENST00000371747 RUSC2Q8N2Y8 1516 aa36.76■■■■□ 3.48
TTC39A-203ENST00000371747 EHMT2Q96KQ7 1210 aa36.75■■■■□ 3.47
TTC39A-203ENST00000371747 CUX1P39880 1505 aa36.69■■■■□ 3.46
TTC39A-203ENST00000371747 FANCD2Q9BXW9 1451 aa36.68■■■■□ 3.46
TTC39A-203ENST00000371747 CSRNP3Q8WYN3 585 aa36.65■■■■□ 3.46
TTC39A-203ENST00000371747 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
TTC39A-203ENST00000371747 CEP164Q9UPV0 1460 aa36.44■■■■□ 3.42
TTC39A-203ENST00000371747 KIF21AQ7Z4S6 1674 aa36.4■■■■□ 3.42
TTC39A-203ENST00000371747 GOLGA3Q08378 1498 aa36.36■■■■□ 3.41
TTC39A-203ENST00000371747 KIF21BO75037 1637 aa36.33■■■■□ 3.41
TTC39A-203ENST00000371747 TNIKQ9UKE5 1360 aa36.33■■■■□ 3.41
TTC39A-203ENST00000371747 DNMBPQ6XZF7 1577 aa36.29■■■■□ 3.4
TTC39A-203ENST00000371747 TOPBP1Q92547 1522 aa36.27■■■■□ 3.4
TTC39A-203ENST00000371747 URB2Q14146 1524 aaKnown RBP36.26■■■■□ 3.4
TTC39A-203ENST00000371747 FGD5Q6ZNL6 1462 aa36.23■■■■□ 3.39
TTC39A-203ENST00000371747 UBTFP17480 764 aaKnown RBP36.23■■■■□ 3.39
TTC39A-203ENST00000371747 KIF27Q86VH2 1401 aa36.23■■■■□ 3.39
TTC39A-203ENST00000371747 CEP162Q5TB80 1403 aa36.16■■■■□ 3.38
TTC39A-203ENST00000371747 RAPGEF2Q9Y4G8 1499 aa36.12■■■■□ 3.37
TTC39A-203ENST00000371747 POLA1P09884 1462 aaPredicted RBP36.08■■■■□ 3.37
TTC39A-203ENST00000371747 PRXQ9BXM0 1461 aa36.08■■■■□ 3.37
TTC39A-203ENST00000371747 CUX2O14529 1486 aa36.07■■■■□ 3.37
TTC39A-203ENST00000371747 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
TTC39A-203ENST00000371747 ERICH3Q5RHP9 1530 aa36.02■■■■□ 3.36
TTC39A-203ENST00000371747 RAD54L2Q9Y4B4 1467 aa36■■■■□ 3.35
TTC39A-203ENST00000371747 PCGF6Q9BYE7 350 aa36■■■■□ 3.35
TTC39A-203ENST00000371747 ERCC6Q03468 1493 aa36■■■■□ 3.35
TTC39A-203ENST00000371747 ABCA10Q8WWZ4 1543 aa35.91■■■■□ 3.34
TTC39A-203ENST00000371747 IGF1RP08069 1367 aa35.9■■■■□ 3.34
TTC39A-203ENST00000371747 WDR62O43379 1518 aa35.88■■■■□ 3.33
TTC39A-203ENST00000371747 TRIM26Q12899 539 aaPredicted RBP35.87■■■■□ 3.33
TTC39A-203ENST00000371747 THOC2Q8NI27 1593 aaKnown RBP35.83■■■■□ 3.33
TTC39A-203ENST00000371747 CLIP1P30622 1438 aa35.81■■■■□ 3.32
TTC39A-203ENST00000371747 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
TTC39A-203ENST00000371747 TARBP1Q13395 1621 aaKnown RBP35.76■■■■□ 3.31
TTC39A-203ENST00000371747 CARMIL1Q5VZK9 1371 aa35.72■■■■□ 3.31
TTC39A-203ENST00000371747 TDRD9Q8NDG6 1382 aaKnown RBP35.67■■■■□ 3.3
TTC39A-203ENST00000371747 PPARGC1BQ86YN6 1023 aaKnown RBP35.61■■■■□ 3.29
TTC39A-203ENST00000371747 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
TTC39A-203ENST00000371747 RANGAP1P46060 587 aaPredicted RBP35.58■■■■□ 3.29
TTC39A-203ENST00000371747 IFT140Q96RY7 1462 aa35.58■■■■□ 3.29
TTC39A-203ENST00000371747 GAPVD1Q14C86 1478 aa35.56■■■■□ 3.28
TTC39A-203ENST00000371747 CUL7Q14999 1698 aa35.53■■■■□ 3.28
TTC39A-203ENST00000371747 VPS8Q8N3P4 1428 aa35.53■■■■□ 3.28
TTC39A-203ENST00000371747 AQRO60306 1485 aaKnown RBP eCLIP35.48■■■■□ 3.27
TTC39A-203ENST00000371747 ZNF608Q9ULD9 1512 aaPredicted RBP35.46■■■■□ 3.27
TTC39A-203ENST00000371747 ARAP1Q96P48 1450 aa35.42■■■■□ 3.26
TTC39A-203ENST00000371747 PBRM1Q86U86 1689 aa35.36■■■■□ 3.25
TTC39A-203ENST00000371747 ARHGAP35Q9NRY4 1499 aa35.35■■■■□ 3.25
TTC39A-203ENST00000371747 GRIN2BQ13224 1484 aa35.29■■■■□ 3.24
TTC39A-203ENST00000371747 EIF4G3O43432 1585 aaKnown RBP35.28■■■■□ 3.24
TTC39A-203ENST00000371747 TTBK1Q5TCY1 1321 aaPredicted RBP35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms