RNA–Protein interactions for RNA: ENST00000620660.4

RYK-208, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RYK, Length 2,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-208ENST00000620660 NISCHQ9Y2I1 1504 aa42.59■■■■■ 4.41
RYK-208ENST00000620660 SHROOM4Q9ULL8 1493 aa37.92■■■■□ 3.66
RYK-208ENST00000620660 SUPT5HO00267 1087 aaKnown RBP37.54■■■■□ 3.6
RYK-208ENST00000620660 HRCP23327 699 aa36.65■■■■□ 3.46
RYK-208ENST00000620660 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
RYK-208ENST00000620660 PCGF6Q9BYE7 350 aa36.5■■■■□ 3.43
RYK-208ENST00000620660 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
RYK-208ENST00000620660 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
RYK-208ENST00000620660 PPARGC1BQ86YN6 1023 aaKnown RBP36.28■■■■□ 3.4
RYK-208ENST00000620660 ZCCHC6Q5VYS8 1495 aaKnown RBP36.1■■■■□ 3.37
RYK-208ENST00000620660 LOC105371045A0A1W2PR82 267 aa35.76■■■■□ 3.32
RYK-208ENST00000620660 CCDC180Q9P1Z9 1646 aa35.4■■■■□ 3.26
RYK-208ENST00000620660 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
RYK-208ENST00000620660 TRIM26Q12899 539 aaPredicted RBP35.18■■■■□ 3.22
RYK-208ENST00000620660 EHMT2Q96KQ7 1210 aa34.92■■■■□ 3.18
RYK-208ENST00000620660 FAM9AQ8IZU1 332 aaPredicted RBP34.84■■■■□ 3.17
RYK-208ENST00000620660 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
RYK-208ENST00000620660 ZEB1P37275 1124 aaPredicted RBP34.56■■■■□ 3.12
RYK-208ENST00000620660 SCAF1Q9H7N4 1312 aaKnown RBP34.47■■■■□ 3.11
RYK-208ENST00000620660 PELP1Q8IZL8 1130 aaKnown RBP34.25■■■■□ 3.07
RYK-208ENST00000620660 ABCC9O60706 1549 aa34.21■■■■□ 3.07
RYK-208ENST00000620660 RSF1Q96T23 1441 aaPredicted RBP34.19■■■■□ 3.06
RYK-208ENST00000620660 SCRIBQ14160 1630 aa34.09■■■■□ 3.05
RYK-208ENST00000620660 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
RYK-208ENST00000620660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.05■■■■□ 3.04
RYK-208ENST00000620660 TTBK1Q5TCY1 1321 aaPredicted RBP33.94■■■■□ 3.02
RYK-208ENST00000620660 CCER1Q8TC90 406 aaPredicted RBP33.92■■■■□ 3.02
RYK-208ENST00000620660 NEUROD1Q13562 356 aa33.79■■■■□ 3
RYK-208ENST00000620660 ACIN1Q9UKV3 1341 aaKnown RBP33.72■■■□□ 2.99
RYK-208ENST00000620660 GTF3C3Q9Y5Q9 886 aa33.59■■■□□ 2.97
RYK-208ENST00000620660 DIEXFQ68CQ4 756 aaKnown RBP33.57■■■□□ 2.96
RYK-208ENST00000620660 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
RYK-208ENST00000620660 CENPBP07199 599 aaPredicted RBP33.42■■■□□ 2.94
RYK-208ENST00000620660 MROH2BQ7Z745 1585 aa33.37■■■□□ 2.93
RYK-208ENST00000620660 YTHDC1Q96MU7 727 aaKnown RBP33.3■■■□□ 2.92
RYK-208ENST00000620660 WIZO95785 1651 aa33.25■■■□□ 2.91
RYK-208ENST00000620660 UBTFP17480 764 aaKnown RBP33.01■■■□□ 2.87
RYK-208ENST00000620660 ABCC8Q09428 1581 aa33■■■□□ 2.87
RYK-208ENST00000620660 CEP162Q5TB80 1403 aa32.98■■■□□ 2.87
RYK-208ENST00000620660 ZNF316A6NFI3 1004 aaPredicted RBP32.96■■■□□ 2.87
RYK-208ENST00000620660 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.87
RYK-208ENST00000620660 HNRNPUL2Q1KMD3 747 aaKnown RBP32.88■■■□□ 2.85
RYK-208ENST00000620660 SOGA1O94964 1423 aa32.86■■■□□ 2.85
RYK-208ENST00000620660 MIER1Q8N108 512 aa32.8■■■□□ 2.84
RYK-208ENST00000620660 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
RYK-208ENST00000620660 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
RYK-208ENST00000620660 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
RYK-208ENST00000620660 NACADO15069 1562 aa32.73■■■□□ 2.83
RYK-208ENST00000620660 CSRNP3Q8WYN3 585 aa32.69■■■□□ 2.82
RYK-208ENST00000620660 RUSC2Q8N2Y8 1516 aa32.69■■■□□ 2.82
RYK-208ENST00000620660 RANGAP1P46060 587 aaPredicted RBP32.66■■■□□ 2.82
RYK-208ENST00000620660 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
RYK-208ENST00000620660 MYT1Q01538 1121 aa32.61■■■□□ 2.81
RYK-208ENST00000620660 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.79
RYK-208ENST00000620660 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
RYK-208ENST00000620660 GOLGA3Q08378 1498 aa32.37■■■□□ 2.77
RYK-208ENST00000620660 APLP2Q06481 763 aa32.34■■■□□ 2.77
RYK-208ENST00000620660 EEA1Q15075 1411 aa32.28■■■□□ 2.76
RYK-208ENST00000620660 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
RYK-208ENST00000620660 CLIP1P30622 1438 aa32.21■■■□□ 2.75
RYK-208ENST00000620660 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.73
RYK-208ENST00000620660 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
RYK-208ENST00000620660 VPS8Q8N3P4 1428 aa32.02■■■□□ 2.72
RYK-208ENST00000620660 SUPT16HQ9Y5B9 1047 aaKnown RBP32■■■□□ 2.71
RYK-208ENST00000620660 RAPGEF2Q9Y4G8 1499 aa31.94■■■□□ 2.7
RYK-208ENST00000620660 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
RYK-208ENST00000620660 ITGAEP38570 1179 aa31.87■■■□□ 2.69
RYK-208ENST00000620660 DHX57Q6P158 1386 aaKnown RBP31.83■■■□□ 2.69
RYK-208ENST00000620660 KIF21BO75037 1637 aa31.81■■■□□ 2.68
RYK-208ENST00000620660 KANK4Q5T7N3 995 aaPredicted RBP31.78■■■□□ 2.68
RYK-208ENST00000620660 BCANQ96GW7 911 aa31.76■■■□□ 2.68
RYK-208ENST00000620660 KCNH8Q96L42 1107 aa31.74■■■□□ 2.67
RYK-208ENST00000620660 UNC13AQ9UPW8 1703 aa31.73■■■□□ 2.67
RYK-208ENST00000620660 TSHZ2Q9NRE2 1034 aa31.69■■■□□ 2.66
RYK-208ENST00000620660 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
RYK-208ENST00000620660 CLSPNQ9HAW4 1339 aa31.58■■■□□ 2.65
RYK-208ENST00000620660 ARAP1Q96P48 1450 aa31.45■■■□□ 2.63
RYK-208ENST00000620660 FKBP8Q14318 412 aa31.43■■■□□ 2.62
RYK-208ENST00000620660 ANP32EQ9BTT0 268 aa31.42■■■□□ 2.62
RYK-208ENST00000620660 DDX10Q13206 875 aaKnown RBP31.41■■■□□ 2.62
RYK-208ENST00000620660 HIRIP3Q9BW71 556 aaPredicted RBP31.38■■■□□ 2.61
RYK-208ENST00000620660 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
RYK-208ENST00000620660 CCNB3Q8WWL7 1395 aa31.34■■■□□ 2.61
RYK-208ENST00000620660 BICRAQ9NZM4 1560 aa31.33■■■□□ 2.61
RYK-208ENST00000620660 SIN3AQ96ST3 1273 aa31.28■■■□□ 2.6
RYK-208ENST00000620660 RRBP1Q9P2E9 1410 aaKnown RBP31.27■■■□□ 2.6
RYK-208ENST00000620660 RAB3GAP2Q9H2M9 1393 aa31.26■■■□□ 2.59
RYK-208ENST00000620660 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
RYK-208ENST00000620660 TRIM52Q96A61 297 aa31.25■■■□□ 2.59
RYK-208ENST00000620660 TOP2BQ02880 1626 aa31.23■■■□□ 2.59
RYK-208ENST00000620660 PRXQ9BXM0 1461 aa31.22■■■□□ 2.59
RYK-208ENST00000620660 FAM50AQ14320 339 aaKnown RBP31.2■■■□□ 2.58
RYK-208ENST00000620660 ATP1B4Q9UN42 357 aaPredicted RBP31.18■■■□□ 2.58
RYK-208ENST00000620660 NEFLP07196 543 aa31.16■■■□□ 2.58
RYK-208ENST00000620660 ERICH3Q5RHP9 1530 aa31.13■■■□□ 2.57
RYK-208ENST00000620660 MAPKBP1O60336 1514 aa31.07■■■□□ 2.56
RYK-208ENST00000620660 ARHGAP35Q9NRY4 1499 aa31.07■■■□□ 2.56
RYK-208ENST00000620660 KIF27Q86VH2 1401 aa31.05■■■□□ 2.56
RYK-208ENST00000620660 P3H3Q8IVL6 736 aa31.04■■■□□ 2.56
RYK-208ENST00000620660 WDR97A6NE52 1622 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms