Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
PCDHGA7Q9Y5G6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.63■■■□□ 2.81
PCDHGA7Q9Y5G6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.13■■■□□ 2.73
PCDHGA7Q9Y5G6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
PCDHGA7Q9Y5G6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDHGA7Q9Y5G6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.99■■■□□ 2.71
PCDHGA7Q9Y5G6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHGA7Q9Y5G6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHGA7Q9Y5G6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
PCDHGA7Q9Y5G6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.35■■■□□ 2.61
PCDHGA7Q9Y5G6 AL356512.1-201ENST00000607453 1739 ntBASIC31.29■■■□□ 2.6
PCDHGA7Q9Y5G6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDHGA7Q9Y5G6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
PCDHGA7Q9Y5G6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.07■■■□□ 2.56
PCDHGA7Q9Y5G6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.06■■■□□ 2.56
PCDHGA7Q9Y5G6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
PCDHGA7Q9Y5G6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.89■■■□□ 2.54
PCDHGA7Q9Y5G6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
PCDHGA7Q9Y5G6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.88■■■□□ 2.53
PCDHGA7Q9Y5G6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHGA7Q9Y5G6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PCDHGA7Q9Y5G6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.7■■■□□ 2.5
PCDHGA7Q9Y5G6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
PCDHGA7Q9Y5G6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.63■■■□□ 2.49
PCDHGA7Q9Y5G6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PCDHGA7Q9Y5G6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHGA7Q9Y5G6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHGA7Q9Y5G6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
PCDHGA7Q9Y5G6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCDHGA7Q9Y5G6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHGA7Q9Y5G6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHGA7Q9Y5G6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.26■■■□□ 2.43
PCDHGA7Q9Y5G6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
PCDHGA7Q9Y5G6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
PCDHGA7Q9Y5G6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDHGA7Q9Y5G6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PCDHGA7Q9Y5G6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
PCDHGA7Q9Y5G6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.13■■■□□ 2.41
PCDHGA7Q9Y5G6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
PCDHGA7Q9Y5G6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCDHGA7Q9Y5G6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHGA7Q9Y5G6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDHGA7Q9Y5G6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.9■■■□□ 2.38
PCDHGA7Q9Y5G6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDHGA7Q9Y5G6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHGA7Q9Y5G6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
PCDHGA7Q9Y5G6 AC006077.2-201ENST00000623591 457 ntBASIC29.7■■■□□ 2.35
PCDHGA7Q9Y5G6 ZNRF2P1-201ENST00000441407 443 ntBASIC29.67■■■□□ 2.34
PCDHGA7Q9Y5G6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHGA7Q9Y5G6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.61■■■□□ 2.33
PCDHGA7Q9Y5G6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
PCDHGA7Q9Y5G6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.5■■■□□ 2.31
PCDHGA7Q9Y5G6 AC015813.7-201ENST00000623294 581 ntBASIC29.5■■■□□ 2.31
PCDHGA7Q9Y5G6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHGA7Q9Y5G6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHGA7Q9Y5G6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.42■■■□□ 2.3
PCDHGA7Q9Y5G6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGA7Q9Y5G6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGA7Q9Y5G6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGA7Q9Y5G6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHGA7Q9Y5G6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHGA7Q9Y5G6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.2■■■□□ 2.27
PCDHGA7Q9Y5G6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHGA7Q9Y5G6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
PCDHGA7Q9Y5G6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHGA7Q9Y5G6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHGA7Q9Y5G6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHGA7Q9Y5G6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.02■■■□□ 2.24
PCDHGA7Q9Y5G6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHGA7Q9Y5G6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PCDHGA7Q9Y5G6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PCDHGA7Q9Y5G6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
PCDHGA7Q9Y5G6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHGA7Q9Y5G6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHGA7Q9Y5G6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
PCDHGA7Q9Y5G6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PCDHGA7Q9Y5G6 AP002365.1-201ENST00000603448 772 ntBASIC28.9■■■□□ 2.22
PCDHGA7Q9Y5G6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
PCDHGA7Q9Y5G6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.85■■■□□ 2.21
PCDHGA7Q9Y5G6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHGA7Q9Y5G6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
PCDHGA7Q9Y5G6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
PCDHGA7Q9Y5G6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHGA7Q9Y5G6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.68■■■□□ 2.18
PCDHGA7Q9Y5G6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.67■■■□□ 2.18
PCDHGA7Q9Y5G6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHGA7Q9Y5G6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHGA7Q9Y5G6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.64■■■□□ 2.18
PCDHGA7Q9Y5G6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHGA7Q9Y5G6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
PCDHGA7Q9Y5G6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PCDHGA7Q9Y5G6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.6■■■□□ 2.17
PCDHGA7Q9Y5G6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHGA7Q9Y5G6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.54■■■□□ 2.16
PCDHGA7Q9Y5G6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.54■■■□□ 2.16
PCDHGA7Q9Y5G6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGA7Q9Y5G6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGA7Q9Y5G6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.51■■■□□ 2.15
PCDHGA7Q9Y5G6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHGA7Q9Y5G6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms