Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
IRX4P78413 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IRX4P78413 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IRX4P78413 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IRX4P78413 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.89□□□□□ -0.03
IRX4P78413 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IRX4P78413 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 CICP20-201ENST00000443330 2801 ntBASIC14.88□□□□□ -0.03
IRX4P78413 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
IRX4P78413 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.88□□□□□ -0.03
IRX4P78413 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.88□□□□□ -0.03
IRX4P78413 PUDPP3-201ENST00000445368 636 ntBASIC14.88□□□□□ -0.03
IRX4P78413 AC098935.1-201ENST00000446057 611 ntBASIC14.88□□□□□ -0.03
IRX4P78413 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 RN7SL818P-201ENST00000485099 259 ntBASIC14.88□□□□□ -0.03
IRX4P78413 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.88□□□□□ -0.03
IRX4P78413 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 RTN3P1-201ENST00000536295 711 ntBASIC14.88□□□□□ -0.03
IRX4P78413 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 RN7SL725P-201ENST00000606439 259 ntBASIC14.88□□□□□ -0.03
IRX4P78413 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.88□□□□□ -0.03
IRX4P78413 AC103691.2-201ENST00000618824 433 ntBASIC14.88□□□□□ -0.03
IRX4P78413 AL136295.7-201ENST00000619226 1200 ntBASIC14.88□□□□□ -0.03
IRX4P78413 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.88□□□□□ -0.03
IRX4P78413 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.88□□□□□ -0.03
IRX4P78413 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.88□□□□□ -0.03
IRX4P78413 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 STRCP1-201ENST00000509801 5328 ntBASIC14.88□□□□□ -0.03
IRX4P78413 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.88□□□□□ -0.03
IRX4P78413 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.88□□□□□ -0.03
IRX4P78413 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IRX4P78413 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
IRX4P78413 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
IRX4P78413 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 AC026316.1-201ENST00000398900 414 ntBASIC14.87□□□□□ -0.03
IRX4P78413 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 PDIA3P2-201ENST00000428073 158 ntBASIC14.87□□□□□ -0.03
IRX4P78413 NOC2LP1-201ENST00000450578 752 ntBASIC14.87□□□□□ -0.03
IRX4P78413 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 AC019193.1-201ENST00000506678 823 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms