RNA–Protein interactions for RNA: ENST00000327419.6

C11orf87-201, Transcript of chromosome 11 open reading frame 87, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf87, Length 5,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf87-201ENST00000327419 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
C11orf87-201ENST00000327419 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
C11orf87-201ENST00000327419 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
C11orf87-201ENST00000327419 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
C11orf87-201ENST00000327419 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
C11orf87-201ENST00000327419 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
C11orf87-201ENST00000327419 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
C11orf87-201ENST00000327419 APLP2Q06481 763 aa21.77■■□□□ 1.08
C11orf87-201ENST00000327419 ABCC9O60706 1549 aa21.64■■□□□ 1.06
C11orf87-201ENST00000327419 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.05
C11orf87-201ENST00000327419 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
C11orf87-201ENST00000327419 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
C11orf87-201ENST00000327419 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
C11orf87-201ENST00000327419 TRIM41Q8WV44 630 aa21.33■■□□□ 1
C11orf87-201ENST00000327419 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
C11orf87-201ENST00000327419 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
C11orf87-201ENST00000327419 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
C11orf87-201ENST00000327419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
C11orf87-201ENST00000327419 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.97
C11orf87-201ENST00000327419 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
C11orf87-201ENST00000327419 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
C11orf87-201ENST00000327419 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
C11orf87-201ENST00000327419 FBLN2P98095 1184 aa20.78■□□□□ 0.92
C11orf87-201ENST00000327419 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
C11orf87-201ENST00000327419 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
C11orf87-201ENST00000327419 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
C11orf87-201ENST00000327419 ITGAEP38570 1179 aa20.52■□□□□ 0.88
C11orf87-201ENST00000327419 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
C11orf87-201ENST00000327419 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
C11orf87-201ENST00000327419 NEFLP07196 543 aa20.36■□□□□ 0.85
C11orf87-201ENST00000327419 HRCP23327 699 aa20.28■□□□□ 0.84
C11orf87-201ENST00000327419 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
C11orf87-201ENST00000327419 LOC105371045A0A1W2PR82 267 aa20.21■□□□□ 0.83
C11orf87-201ENST00000327419 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
C11orf87-201ENST00000327419 POLR3GLQ9BT43 218 aa20.19■□□□□ 0.82
C11orf87-201ENST00000327419 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
C11orf87-201ENST00000327419 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
C11orf87-201ENST00000327419 MYT1Q01538 1121 aa20.06■□□□□ 0.8
C11orf87-201ENST00000327419 P3H3Q8IVL6 736 aa20.04■□□□□ 0.8
C11orf87-201ENST00000327419 FAM50AQ14320 339 aaKnown RBP20.03■□□□□ 0.8
C11orf87-201ENST00000327419 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
C11orf87-201ENST00000327419 NPM1P06748 294 aaKnown RBP eCLIP19.98■□□□□ 0.79
C11orf87-201ENST00000327419 BCANQ96GW7 911 aa19.96■□□□□ 0.79
C11orf87-201ENST00000327419 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
C11orf87-201ENST00000327419 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.78
C11orf87-201ENST00000327419 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
C11orf87-201ENST00000327419 ZNF777Q9ULD5 760 aaPredicted RBP19.84■□□□□ 0.77
C11orf87-201ENST00000327419 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
C11orf87-201ENST00000327419 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
C11orf87-201ENST00000327419 DIEXFQ68CQ4 756 aaKnown RBP19.73■□□□□ 0.75
C11orf87-201ENST00000327419 DAXXQ9UER7 740 aaPredicted RBP19.72■□□□□ 0.75
C11orf87-201ENST00000327419 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
C11orf87-201ENST00000327419 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
C11orf87-201ENST00000327419 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
C11orf87-201ENST00000327419 CDK11AQ9UQ88 783 aaPredicted RBP19.63■□□□□ 0.73
C11orf87-201ENST00000327419 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
C11orf87-201ENST00000327419 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
C11orf87-201ENST00000327419 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
C11orf87-201ENST00000327419 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
C11orf87-201ENST00000327419 CHGAP10645 457 aaKnown RBP19.53■□□□□ 0.72
C11orf87-201ENST00000327419 NACADO15069 1562 aa19.49■□□□□ 0.71
C11orf87-201ENST00000327419 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
C11orf87-201ENST00000327419 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
C11orf87-201ENST00000327419 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
C11orf87-201ENST00000327419 ARID4BQ4LE39 1312 aaPredicted RBP19.38■□□□□ 0.69
C11orf87-201ENST00000327419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
C11orf87-201ENST00000327419 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.69
C11orf87-201ENST00000327419 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
C11orf87-201ENST00000327419 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
C11orf87-201ENST00000327419 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
C11orf87-201ENST00000327419 CLSPNQ9HAW4 1339 aa19.3■□□□□ 0.68
C11orf87-201ENST00000327419 ANP32CO43423 234 aa19.29■□□□□ 0.68
C11orf87-201ENST00000327419 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
C11orf87-201ENST00000327419 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
C11orf87-201ENST00000327419 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
C11orf87-201ENST00000327419 TSPY4P0CV99 314 aa19.16■□□□□ 0.66
C11orf87-201ENST00000327419 TSPY10P0CW01 314 aa19.16■□□□□ 0.66
C11orf87-201ENST00000327419 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
C11orf87-201ENST00000327419 C14orf37Q86TY3 774 aa19.12■□□□□ 0.65
C11orf87-201ENST00000327419 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
C11orf87-201ENST00000327419 A0A0G2JS52 829 aa19.08■□□□□ 0.65
C11orf87-201ENST00000327419 PPP1R15AO75807 674 aaPredicted RBP19.07■□□□□ 0.64
C11orf87-201ENST00000327419 NEFMP07197 916 aa19.07■□□□□ 0.64
C11orf87-201ENST00000327419 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
C11orf87-201ENST00000327419 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
C11orf87-201ENST00000327419 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
C11orf87-201ENST00000327419 DCAF1Q9Y4B6 1507 aa19.01■□□□□ 0.63
C11orf87-201ENST00000327419 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
C11orf87-201ENST00000327419 ZBTB7CA1YPR0 619 aa18.99■□□□□ 0.63
C11orf87-201ENST00000327419 MLECQ14165 292 aa18.98■□□□□ 0.63
C11orf87-201ENST00000327419 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
C11orf87-201ENST00000327419 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
C11orf87-201ENST00000327419 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
C11orf87-201ENST00000327419 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
C11orf87-201ENST00000327419 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
C11orf87-201ENST00000327419 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
C11orf87-201ENST00000327419 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
C11orf87-201ENST00000327419 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
C11orf87-201ENST00000327419 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
C11orf87-201ENST00000327419 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms