RNA–Protein interactions for RNA: ENST00000369020.7

SCML4-201, Transcript of Scm polycomb group protein like 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCML4, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-201ENST00000369020 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
SCML4-201ENST00000369020 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
SCML4-201ENST00000369020 ABCC9O60706 1549 aa30.95■■■□□ 2.55
SCML4-201ENST00000369020 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
SCML4-201ENST00000369020 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
SCML4-201ENST00000369020 NACADO15069 1562 aa29.7■■■□□ 2.35
SCML4-201ENST00000369020 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
SCML4-201ENST00000369020 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
SCML4-201ENST00000369020 DCAF1Q9Y4B6 1507 aa29.41■■■□□ 2.3
SCML4-201ENST00000369020 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
SCML4-201ENST00000369020 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
SCML4-201ENST00000369020 BICRAQ9NZM4 1560 aa28.85■■■□□ 2.21
SCML4-201ENST00000369020 SCRIBQ14160 1630 aa28.81■■■□□ 2.2
SCML4-201ENST00000369020 SHROOM4Q9ULL8 1493 aa28.55■■■□□ 2.16
SCML4-201ENST00000369020 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
SCML4-201ENST00000369020 EIF4G1Q04637 1599 aaKnown RBP28.1■■■□□ 2.09
SCML4-201ENST00000369020 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
SCML4-201ENST00000369020 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.04
SCML4-201ENST00000369020 SMARCA4P51532 1647 aa27.56■■■□□ 2
SCML4-201ENST00000369020 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
SCML4-201ENST00000369020 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
SCML4-201ENST00000369020 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.99
SCML4-201ENST00000369020 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
SCML4-201ENST00000369020 SMARCA2P51531 1590 aa27.39■■□□□ 1.97
SCML4-201ENST00000369020 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
SCML4-201ENST00000369020 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
SCML4-201ENST00000369020 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
SCML4-201ENST00000369020 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
SCML4-201ENST00000369020 WIZO95785 1651 aa27.06■■□□□ 1.92
SCML4-201ENST00000369020 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
SCML4-201ENST00000369020 NESP48681 1621 aa26.78■■□□□ 1.88
SCML4-201ENST00000369020 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
SCML4-201ENST00000369020 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
SCML4-201ENST00000369020 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
SCML4-201ENST00000369020 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
SCML4-201ENST00000369020 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
SCML4-201ENST00000369020 CFTRP13569 1480 aa26.49■■□□□ 1.83
SCML4-201ENST00000369020 CUX2O14529 1486 aa26.41■■□□□ 1.82
SCML4-201ENST00000369020 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
SCML4-201ENST00000369020 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.82
SCML4-201ENST00000369020 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
SCML4-201ENST00000369020 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
SCML4-201ENST00000369020 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
SCML4-201ENST00000369020 MRC2Q9UBG0 1479 aa26.26■■□□□ 1.79
SCML4-201ENST00000369020 WDR62O43379 1518 aa26.17■■□□□ 1.78
SCML4-201ENST00000369020 PRDM2Q13029 1718 aa26.14■■□□□ 1.78
SCML4-201ENST00000369020 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
SCML4-201ENST00000369020 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
SCML4-201ENST00000369020 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
SCML4-201ENST00000369020 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
SCML4-201ENST00000369020 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
SCML4-201ENST00000369020 CUX1P39880 1505 aa25.7■■□□□ 1.7
SCML4-201ENST00000369020 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
SCML4-201ENST00000369020 DNAJC5Q9H3Z4 198 aa25.66■■□□□ 1.7
SCML4-201ENST00000369020 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
SCML4-201ENST00000369020 FGD5Q6ZNL6 1462 aa25.61■■□□□ 1.69
SCML4-201ENST00000369020 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
SCML4-201ENST00000369020 SOGA1O94964 1423 aa25.59■■□□□ 1.69
SCML4-201ENST00000369020 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
SCML4-201ENST00000369020 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
SCML4-201ENST00000369020 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.67
SCML4-201ENST00000369020 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
SCML4-201ENST00000369020 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
SCML4-201ENST00000369020 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
SCML4-201ENST00000369020 SYNJ1O43426 1573 aa25.45■■□□□ 1.66
SCML4-201ENST00000369020 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
SCML4-201ENST00000369020 WDR97A6NE52 1622 aa25.38■■□□□ 1.65
SCML4-201ENST00000369020 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
SCML4-201ENST00000369020 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
SCML4-201ENST00000369020 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
SCML4-201ENST00000369020 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
SCML4-201ENST00000369020 SNAPC4Q5SXM2 1469 aa25.26■■□□□ 1.63
SCML4-201ENST00000369020 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
SCML4-201ENST00000369020 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
SCML4-201ENST00000369020 FBLN2P98095 1184 aa25.21■■□□□ 1.63
SCML4-201ENST00000369020 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
SCML4-201ENST00000369020 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.61
SCML4-201ENST00000369020 CHD1O14646 1710 aa25.13■■□□□ 1.61
SCML4-201ENST00000369020 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
SCML4-201ENST00000369020 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
SCML4-201ENST00000369020 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
SCML4-201ENST00000369020 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
SCML4-201ENST00000369020 ADAMTS12P58397 1594 aa25■■□□□ 1.59
SCML4-201ENST00000369020 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
SCML4-201ENST00000369020 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
SCML4-201ENST00000369020 IGF1RP08069 1367 aa24.94■■□□□ 1.58
SCML4-201ENST00000369020 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
SCML4-201ENST00000369020 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
SCML4-201ENST00000369020 RIMBP3CA6NJZ7 1639 aa24.87■■□□□ 1.57
SCML4-201ENST00000369020 RIMBP3BA6NNM3 1639 aa24.87■■□□□ 1.57
SCML4-201ENST00000369020 RIMBP3Q9UFD9 1639 aa24.87■■□□□ 1.57
SCML4-201ENST00000369020 NUP160Q12769 1436 aa24.86■■□□□ 1.57
SCML4-201ENST00000369020 CEP170Q5SW79 1584 aa24.82■■□□□ 1.56
SCML4-201ENST00000369020 CUL7Q14999 1698 aa24.79■■□□□ 1.56
SCML4-201ENST00000369020 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
SCML4-201ENST00000369020 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
SCML4-201ENST00000369020 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
SCML4-201ENST00000369020 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
SCML4-201ENST00000369020 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.55
SCML4-201ENST00000369020 JPH4Q96JJ6 628 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms