RNA–Protein interactions for RNA: ENST00000509801.1

STRCP1-201, Transcript of stereocilin pseudogene 1, humanhuman

BASIC

Gene STRCP1, Length 5,328 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRCP1-201ENST00000509801 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
STRCP1-201ENST00000509801 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.12
STRCP1-201ENST00000509801 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
STRCP1-201ENST00000509801 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
STRCP1-201ENST00000509801 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
STRCP1-201ENST00000509801 EHMT2Q96KQ7 1210 aa21.32■■□□□ 1
STRCP1-201ENST00000509801 APLP2Q06481 763 aa21.27■■□□□ 1
STRCP1-201ENST00000509801 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
STRCP1-201ENST00000509801 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
STRCP1-201ENST00000509801 ZEB1P37275 1124 aaPredicted RBP20.69■□□□□ 0.9
STRCP1-201ENST00000509801 CENPBP07199 599 aaPredicted RBP20.66■□□□□ 0.9
STRCP1-201ENST00000509801 TTBK1Q5TCY1 1321 aaPredicted RBP20.66■□□□□ 0.9
STRCP1-201ENST00000509801 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
STRCP1-201ENST00000509801 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
STRCP1-201ENST00000509801 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
STRCP1-201ENST00000509801 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
STRCP1-201ENST00000509801 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
STRCP1-201ENST00000509801 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
STRCP1-201ENST00000509801 NEFLP07196 543 aa20.24■□□□□ 0.83
STRCP1-201ENST00000509801 MYT1Q01538 1121 aa20.07■□□□□ 0.8
STRCP1-201ENST00000509801 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
STRCP1-201ENST00000509801 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
STRCP1-201ENST00000509801 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
STRCP1-201ENST00000509801 HRCP23327 699 aa19.69■□□□□ 0.74
STRCP1-201ENST00000509801 DAXXQ9UER7 740 aaPredicted RBP19.69■□□□□ 0.74
STRCP1-201ENST00000509801 ITGAEP38570 1179 aa19.64■□□□□ 0.73
STRCP1-201ENST00000509801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
STRCP1-201ENST00000509801 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
STRCP1-201ENST00000509801 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
STRCP1-201ENST00000509801 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.73
STRCP1-201ENST00000509801 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.71
STRCP1-201ENST00000509801 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
STRCP1-201ENST00000509801 CNGB1Q14028 1251 aaPredicted RBP19.29■□□□□ 0.68
STRCP1-201ENST00000509801 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.67
STRCP1-201ENST00000509801 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
STRCP1-201ENST00000509801 RTL5Q5HYW3 569 aaPredicted RBP19.22■□□□□ 0.67
STRCP1-201ENST00000509801 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
STRCP1-201ENST00000509801 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
STRCP1-201ENST00000509801 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
STRCP1-201ENST00000509801 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
STRCP1-201ENST00000509801 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
STRCP1-201ENST00000509801 ANP32CO43423 234 aa18.99■□□□□ 0.63
STRCP1-201ENST00000509801 CDK11AQ9UQ88 783 aaPredicted RBP18.89■□□□□ 0.61
STRCP1-201ENST00000509801 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
STRCP1-201ENST00000509801 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
STRCP1-201ENST00000509801 ZNF326Q5BKZ1 582 aaKnown RBP18.86■□□□□ 0.61
STRCP1-201ENST00000509801 ABCC9O60706 1549 aa18.86■□□□□ 0.61
STRCP1-201ENST00000509801 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
STRCP1-201ENST00000509801 BCANQ96GW7 911 aa18.84■□□□□ 0.61
STRCP1-201ENST00000509801 CANXP27824 592 aaKnown RBP18.74■□□□□ 0.59
STRCP1-201ENST00000509801 NEFMP07197 916 aa18.71■□□□□ 0.59
STRCP1-201ENST00000509801 FBLN2P98095 1184 aa18.7■□□□□ 0.58
STRCP1-201ENST00000509801 CSRNP3Q8WYN3 585 aa18.67■□□□□ 0.58
STRCP1-201ENST00000509801 ANP32AP39687 249 aaKnown RBP18.6■□□□□ 0.57
STRCP1-201ENST00000509801 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
STRCP1-201ENST00000509801 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
STRCP1-201ENST00000509801 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
STRCP1-201ENST00000509801 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
STRCP1-201ENST00000509801 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
STRCP1-201ENST00000509801 BCL11AQ9H165 835 aa18.47■□□□□ 0.55
STRCP1-201ENST00000509801 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
STRCP1-201ENST00000509801 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
STRCP1-201ENST00000509801 ANP32BQ92688 251 aaKnown RBP18.36■□□□□ 0.53
STRCP1-201ENST00000509801 FKBP8Q14318 412 aa18.36■□□□□ 0.53
STRCP1-201ENST00000509801 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
STRCP1-201ENST00000509801 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
STRCP1-201ENST00000509801 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
STRCP1-201ENST00000509801 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
STRCP1-201ENST00000509801 HSP90AA1P07900 732 aaKnown RBP18.3■□□□□ 0.52
STRCP1-201ENST00000509801 STAG3Q9UJ98 1225 aa18.28■□□□□ 0.52
STRCP1-201ENST00000509801 CHGAP10645 457 aaKnown RBP18.27■□□□□ 0.52
STRCP1-201ENST00000509801 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
STRCP1-201ENST00000509801 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
STRCP1-201ENST00000509801 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
STRCP1-201ENST00000509801 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
STRCP1-201ENST00000509801 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
STRCP1-201ENST00000509801 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
STRCP1-201ENST00000509801 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
STRCP1-201ENST00000509801 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
STRCP1-201ENST00000509801 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
STRCP1-201ENST00000509801 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
STRCP1-201ENST00000509801 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
STRCP1-201ENST00000509801 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
STRCP1-201ENST00000509801 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
STRCP1-201ENST00000509801 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
STRCP1-201ENST00000509801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
STRCP1-201ENST00000509801 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
STRCP1-201ENST00000509801 EIF5BO60841 1220 aaKnown RBP18.08■□□□□ 0.49
STRCP1-201ENST00000509801 CLIP1P30622 1438 aa18.02■□□□□ 0.48
STRCP1-201ENST00000509801 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.47
STRCP1-201ENST00000509801 GLIPR1L2Q4G1C9 344 aa18.01■□□□□ 0.47
STRCP1-201ENST00000509801 EIF4G2P78344 907 aaKnown RBP eCLIP18■□□□□ 0.47
STRCP1-201ENST00000509801 MYH16Q9H6N6 1097 aa18■□□□□ 0.47
STRCP1-201ENST00000509801 NBR1Q14596 966 aa17.95■□□□□ 0.46
STRCP1-201ENST00000509801 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
STRCP1-201ENST00000509801 EEA1Q15075 1411 aa17.95■□□□□ 0.46
STRCP1-201ENST00000509801 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
STRCP1-201ENST00000509801 MIER1Q8N108 512 aa17.94■□□□□ 0.46
STRCP1-201ENST00000509801 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
STRCP1-201ENST00000509801 DDRGK1Q96HY6 314 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 393.9 ms