RNA–Protein interactions for RNA: ENST00000409245.5

TTC7A-203, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 2 BASIC

Gene TTC7A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-203ENST00000409245 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
TTC7A-203ENST00000409245 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
TTC7A-203ENST00000409245 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
TTC7A-203ENST00000409245 SHROOM4Q9ULL8 1493 aa26.8■■□□□ 1.88
TTC7A-203ENST00000409245 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
TTC7A-203ENST00000409245 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
TTC7A-203ENST00000409245 ABCC9O60706 1549 aa26.18■■□□□ 1.78
TTC7A-203ENST00000409245 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
TTC7A-203ENST00000409245 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
TTC7A-203ENST00000409245 NACADO15069 1562 aa25.88■■□□□ 1.73
TTC7A-203ENST00000409245 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
TTC7A-203ENST00000409245 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
TTC7A-203ENST00000409245 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
TTC7A-203ENST00000409245 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
TTC7A-203ENST00000409245 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
TTC7A-203ENST00000409245 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
TTC7A-203ENST00000409245 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
TTC7A-203ENST00000409245 BICRAQ9NZM4 1560 aa24.92■■□□□ 1.58
TTC7A-203ENST00000409245 WIZO95785 1651 aa24.89■■□□□ 1.58
TTC7A-203ENST00000409245 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
TTC7A-203ENST00000409245 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
TTC7A-203ENST00000409245 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
TTC7A-203ENST00000409245 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
TTC7A-203ENST00000409245 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
TTC7A-203ENST00000409245 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
TTC7A-203ENST00000409245 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
TTC7A-203ENST00000409245 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
TTC7A-203ENST00000409245 TRIM41Q8WV44 630 aa24.27■■□□□ 1.47
TTC7A-203ENST00000409245 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
TTC7A-203ENST00000409245 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.45
TTC7A-203ENST00000409245 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
TTC7A-203ENST00000409245 ABCC8Q09428 1581 aa24.04■■□□□ 1.44
TTC7A-203ENST00000409245 FAM9AQ8IZU1 332 aaPredicted RBP23.96■■□□□ 1.43
TTC7A-203ENST00000409245 HMGXB3Q12766 1538 aa23.91■■□□□ 1.42
TTC7A-203ENST00000409245 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
TTC7A-203ENST00000409245 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
TTC7A-203ENST00000409245 WRNQ14191 1432 aaPredicted RBP eCLIP23.71■■□□□ 1.39
TTC7A-203ENST00000409245 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
TTC7A-203ENST00000409245 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
TTC7A-203ENST00000409245 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
TTC7A-203ENST00000409245 SOGA1O94964 1423 aa23.63■■□□□ 1.37
TTC7A-203ENST00000409245 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
TTC7A-203ENST00000409245 CFTRP13569 1480 aa23.51■■□□□ 1.35
TTC7A-203ENST00000409245 EEA1Q15075 1411 aa23.49■■□□□ 1.35
TTC7A-203ENST00000409245 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
TTC7A-203ENST00000409245 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
TTC7A-203ENST00000409245 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
TTC7A-203ENST00000409245 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
TTC7A-203ENST00000409245 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
TTC7A-203ENST00000409245 CUX1P39880 1505 aa23.37■■□□□ 1.33
TTC7A-203ENST00000409245 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
TTC7A-203ENST00000409245 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
TTC7A-203ENST00000409245 KIF21BO75037 1637 aa23.26■■□□□ 1.31
TTC7A-203ENST00000409245 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
TTC7A-203ENST00000409245 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
TTC7A-203ENST00000409245 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
TTC7A-203ENST00000409245 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
TTC7A-203ENST00000409245 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
TTC7A-203ENST00000409245 MYT1Q01538 1121 aa23.17■■□□□ 1.3
TTC7A-203ENST00000409245 NESP48681 1621 aa23.14■■□□□ 1.3
TTC7A-203ENST00000409245 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
TTC7A-203ENST00000409245 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
TTC7A-203ENST00000409245 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
TTC7A-203ENST00000409245 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
TTC7A-203ENST00000409245 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
TTC7A-203ENST00000409245 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
TTC7A-203ENST00000409245 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
TTC7A-203ENST00000409245 HRCP23327 699 aa23.03■■□□□ 1.28
TTC7A-203ENST00000409245 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
TTC7A-203ENST00000409245 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
TTC7A-203ENST00000409245 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
TTC7A-203ENST00000409245 CUX2O14529 1486 aa22.95■■□□□ 1.26
TTC7A-203ENST00000409245 CLIP1P30622 1438 aa22.93■■□□□ 1.26
TTC7A-203ENST00000409245 TOPBP1Q92547 1522 aa22.93■■□□□ 1.26
TTC7A-203ENST00000409245 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
TTC7A-203ENST00000409245 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
TTC7A-203ENST00000409245 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
TTC7A-203ENST00000409245 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
TTC7A-203ENST00000409245 IGF1RP08069 1367 aa22.84■■□□□ 1.25
TTC7A-203ENST00000409245 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
TTC7A-203ENST00000409245 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
TTC7A-203ENST00000409245 ABCA10Q8WWZ4 1543 aa22.79■■□□□ 1.24
TTC7A-203ENST00000409245 VPS8Q8N3P4 1428 aa22.78■■□□□ 1.24
TTC7A-203ENST00000409245 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
TTC7A-203ENST00000409245 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
TTC7A-203ENST00000409245 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
TTC7A-203ENST00000409245 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
TTC7A-203ENST00000409245 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
TTC7A-203ENST00000409245 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
TTC7A-203ENST00000409245 CUL7Q14999 1698 aa22.61■■□□□ 1.21
TTC7A-203ENST00000409245 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
TTC7A-203ENST00000409245 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
TTC7A-203ENST00000409245 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
TTC7A-203ENST00000409245 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.19
TTC7A-203ENST00000409245 APLP2Q06481 763 aa22.51■■□□□ 1.19
TTC7A-203ENST00000409245 CTTNBP2Q8WZ74 1663 aa22.48■■□□□ 1.19
TTC7A-203ENST00000409245 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
TTC7A-203ENST00000409245 WDR62O43379 1518 aa22.42■■□□□ 1.18
TTC7A-203ENST00000409245 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
TTC7A-203ENST00000409245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms