RNA–Protein interactions for RNA: ENST00000591870.1

SMIM22-209, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMIM22, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-209ENST00000591870 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.15
SMIM22-209ENST00000591870 ABCC9O60706 1549 aa31.5■■■□□ 2.63
SMIM22-209ENST00000591870 CCDC180Q9P1Z9 1646 aa31.12■■■□□ 2.57
SMIM22-209ENST00000591870 DCAF8L2P0C7V8 631 aa29.85■■■□□ 2.37
SMIM22-209ENST00000591870 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
SMIM22-209ENST00000591870 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
SMIM22-209ENST00000591870 NACADO15069 1562 aa29.52■■■□□ 2.32
SMIM22-209ENST00000591870 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
SMIM22-209ENST00000591870 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
SMIM22-209ENST00000591870 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
SMIM22-209ENST00000591870 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
SMIM22-209ENST00000591870 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
SMIM22-209ENST00000591870 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
SMIM22-209ENST00000591870 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
SMIM22-209ENST00000591870 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
SMIM22-209ENST00000591870 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
SMIM22-209ENST00000591870 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
SMIM22-209ENST00000591870 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
SMIM22-209ENST00000591870 DNAJC5Q9H3Z4 198 aa27.28■■□□□ 1.96
SMIM22-209ENST00000591870 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
SMIM22-209ENST00000591870 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
SMIM22-209ENST00000591870 ATAD2BQ9ULI0 1458 aa27.21■■□□□ 1.95
SMIM22-209ENST00000591870 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
SMIM22-209ENST00000591870 SMARCA2P51531 1590 aa27.09■■□□□ 1.93
SMIM22-209ENST00000591870 CUX2O14529 1486 aa27.04■■□□□ 1.92
SMIM22-209ENST00000591870 NESP48681 1621 aa27■■□□□ 1.91
SMIM22-209ENST00000591870 HMGXB3Q12766 1538 aa27■■□□□ 1.91
SMIM22-209ENST00000591870 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
SMIM22-209ENST00000591870 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
SMIM22-209ENST00000591870 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.89
SMIM22-209ENST00000591870 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
SMIM22-209ENST00000591870 LAMC3Q9Y6N6 1575 aa26.66■■□□□ 1.86
SMIM22-209ENST00000591870 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
SMIM22-209ENST00000591870 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
SMIM22-209ENST00000591870 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
SMIM22-209ENST00000591870 WIZO95785 1651 aa26.54■■□□□ 1.84
SMIM22-209ENST00000591870 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SMIM22-209ENST00000591870 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
SMIM22-209ENST00000591870 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
SMIM22-209ENST00000591870 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
SMIM22-209ENST00000591870 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
SMIM22-209ENST00000591870 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
SMIM22-209ENST00000591870 WDR62O43379 1518 aa26.21■■□□□ 1.79
SMIM22-209ENST00000591870 CFTRP13569 1480 aa26.11■■□□□ 1.77
SMIM22-209ENST00000591870 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
SMIM22-209ENST00000591870 OSCARQ8IYS5 282 aa26■■□□□ 1.75
SMIM22-209ENST00000591870 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
SMIM22-209ENST00000591870 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
SMIM22-209ENST00000591870 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
SMIM22-209ENST00000591870 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
SMIM22-209ENST00000591870 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
SMIM22-209ENST00000591870 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
SMIM22-209ENST00000591870 FBLN2P98095 1184 aa25.6■■□□□ 1.69
SMIM22-209ENST00000591870 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
SMIM22-209ENST00000591870 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.68
SMIM22-209ENST00000591870 DNMBPQ6XZF7 1577 aa25.54■■□□□ 1.68
SMIM22-209ENST00000591870 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
SMIM22-209ENST00000591870 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
SMIM22-209ENST00000591870 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
SMIM22-209ENST00000591870 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
SMIM22-209ENST00000591870 CYB5RLQ6IPT4 315 aa25.47■■□□□ 1.67
SMIM22-209ENST00000591870 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
SMIM22-209ENST00000591870 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
SMIM22-209ENST00000591870 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
SMIM22-209ENST00000591870 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
SMIM22-209ENST00000591870 SOGA1O94964 1423 aa25.39■■□□□ 1.66
SMIM22-209ENST00000591870 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
SMIM22-209ENST00000591870 CHD1O14646 1710 aa25.37■■□□□ 1.65
SMIM22-209ENST00000591870 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
SMIM22-209ENST00000591870 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
SMIM22-209ENST00000591870 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
SMIM22-209ENST00000591870 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
SMIM22-209ENST00000591870 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
SMIM22-209ENST00000591870 CUX1P39880 1505 aa25.2■■□□□ 1.62
SMIM22-209ENST00000591870 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
SMIM22-209ENST00000591870 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
SMIM22-209ENST00000591870 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
SMIM22-209ENST00000591870 SYNJ1O43426 1573 aa25.05■■□□□ 1.6
SMIM22-209ENST00000591870 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
SMIM22-209ENST00000591870 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
SMIM22-209ENST00000591870 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
SMIM22-209ENST00000591870 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
SMIM22-209ENST00000591870 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
SMIM22-209ENST00000591870 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
SMIM22-209ENST00000591870 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
SMIM22-209ENST00000591870 ABCA5Q8WWZ7 1642 aa24.84■■□□□ 1.57
SMIM22-209ENST00000591870 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
SMIM22-209ENST00000591870 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
SMIM22-209ENST00000591870 ERCC6L2Q5T890 1561 aa24.71■■□□□ 1.55
SMIM22-209ENST00000591870 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
SMIM22-209ENST00000591870 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
SMIM22-209ENST00000591870 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
SMIM22-209ENST00000591870 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
SMIM22-209ENST00000591870 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
SMIM22-209ENST00000591870 NUP160Q12769 1436 aa24.64■■□□□ 1.54
SMIM22-209ENST00000591870 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
SMIM22-209ENST00000591870 ERICH3Q5RHP9 1530 aa24.59■■□□□ 1.53
SMIM22-209ENST00000591870 PRG4Q92954 1404 aaPredicted RBP24.55■■□□□ 1.52
SMIM22-209ENST00000591870 SHROOM2Q13796 1616 aa24.49■■□□□ 1.51
SMIM22-209ENST00000591870 NPM1P06748 294 aaKnown RBP eCLIP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms