RNA–Protein interactions for RNA: ENST00000640086.1

STRADA-243, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5 BASIC

Gene STRADA, Length 1,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-243ENST00000640086 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
STRADA-243ENST00000640086 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
STRADA-243ENST00000640086 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.98
STRADA-243ENST00000640086 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
STRADA-243ENST00000640086 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
STRADA-243ENST00000640086 ABCC9O60706 1549 aa26.84■■□□□ 1.89
STRADA-243ENST00000640086 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
STRADA-243ENST00000640086 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
STRADA-243ENST00000640086 NACADO15069 1562 aa26.28■■□□□ 1.8
STRADA-243ENST00000640086 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
STRADA-243ENST00000640086 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
STRADA-243ENST00000640086 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
STRADA-243ENST00000640086 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
STRADA-243ENST00000640086 CECR2Q9BXF3 1484 aa25.54■■□□□ 1.68
STRADA-243ENST00000640086 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
STRADA-243ENST00000640086 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
STRADA-243ENST00000640086 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
STRADA-243ENST00000640086 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
STRADA-243ENST00000640086 WIZO95785 1651 aa25.16■■□□□ 1.62
STRADA-243ENST00000640086 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
STRADA-243ENST00000640086 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
STRADA-243ENST00000640086 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
STRADA-243ENST00000640086 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
STRADA-243ENST00000640086 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
STRADA-243ENST00000640086 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
STRADA-243ENST00000640086 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
STRADA-243ENST00000640086 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
STRADA-243ENST00000640086 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
STRADA-243ENST00000640086 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
STRADA-243ENST00000640086 BAZ1BQ9UIG0 1483 aaKnown RBP24.49■■□□□ 1.51
STRADA-243ENST00000640086 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
STRADA-243ENST00000640086 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
STRADA-243ENST00000640086 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
STRADA-243ENST00000640086 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
STRADA-243ENST00000640086 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
STRADA-243ENST00000640086 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
STRADA-243ENST00000640086 EHMT2Q96KQ7 1210 aa24.06■■□□□ 1.44
STRADA-243ENST00000640086 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
STRADA-243ENST00000640086 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
STRADA-243ENST00000640086 SOGA1O94964 1423 aa23.88■■□□□ 1.41
STRADA-243ENST00000640086 CFTRP13569 1480 aa23.87■■□□□ 1.41
STRADA-243ENST00000640086 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
STRADA-243ENST00000640086 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
STRADA-243ENST00000640086 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
STRADA-243ENST00000640086 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
STRADA-243ENST00000640086 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
STRADA-243ENST00000640086 CUX1P39880 1505 aa23.66■■□□□ 1.38
STRADA-243ENST00000640086 NESP48681 1621 aa23.66■■□□□ 1.38
STRADA-243ENST00000640086 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
STRADA-243ENST00000640086 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
STRADA-243ENST00000640086 EEA1Q15075 1411 aa23.58■■□□□ 1.37
STRADA-243ENST00000640086 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
STRADA-243ENST00000640086 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
STRADA-243ENST00000640086 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
STRADA-243ENST00000640086 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
STRADA-243ENST00000640086 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
STRADA-243ENST00000640086 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
STRADA-243ENST00000640086 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
STRADA-243ENST00000640086 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
STRADA-243ENST00000640086 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
STRADA-243ENST00000640086 CEP162Q5TB80 1403 aa23.31■■□□□ 1.32
STRADA-243ENST00000640086 KIF21BO75037 1637 aa23.31■■□□□ 1.32
STRADA-243ENST00000640086 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
STRADA-243ENST00000640086 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
STRADA-243ENST00000640086 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
STRADA-243ENST00000640086 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
STRADA-243ENST00000640086 CUX2O14529 1486 aa23.27■■□□□ 1.32
STRADA-243ENST00000640086 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
STRADA-243ENST00000640086 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
STRADA-243ENST00000640086 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
STRADA-243ENST00000640086 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
STRADA-243ENST00000640086 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
STRADA-243ENST00000640086 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
STRADA-243ENST00000640086 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.31
STRADA-243ENST00000640086 IGF1RP08069 1367 aa23.19■■□□□ 1.3
STRADA-243ENST00000640086 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
STRADA-243ENST00000640086 ERICH3Q5RHP9 1530 aa23.09■■□□□ 1.29
STRADA-243ENST00000640086 CLIP1P30622 1438 aa23.08■■□□□ 1.29
STRADA-243ENST00000640086 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.29
STRADA-243ENST00000640086 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
STRADA-243ENST00000640086 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
STRADA-243ENST00000640086 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
STRADA-243ENST00000640086 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
STRADA-243ENST00000640086 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
STRADA-243ENST00000640086 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
STRADA-243ENST00000640086 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.26
STRADA-243ENST00000640086 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
STRADA-243ENST00000640086 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
STRADA-243ENST00000640086 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
STRADA-243ENST00000640086 ARAP1Q96P48 1450 aa22.84■■□□□ 1.25
STRADA-243ENST00000640086 AQRO60306 1485 aaKnown RBP eCLIP22.83■■□□□ 1.254e-7■■■■■ 28.2
STRADA-243ENST00000640086 WDR62O43379 1518 aa22.81■■□□□ 1.24
STRADA-243ENST00000640086 ARHGAP35Q9NRY4 1499 aa22.79■■□□□ 1.24
STRADA-243ENST00000640086 CUL7Q14999 1698 aa22.77■■□□□ 1.24
STRADA-243ENST00000640086 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
STRADA-243ENST00000640086 HRCP23327 699 aa22.76■■□□□ 1.23
STRADA-243ENST00000640086 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
STRADA-243ENST00000640086 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
STRADA-243ENST00000640086 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
STRADA-243ENST00000640086 APLP2Q06481 763 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms