RNA–Protein interactions for RNA: ENST00000418900.6

HIGD1A-202, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIGD1A, Length 1,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-202ENST00000418900 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
HIGD1A-202ENST00000418900 ABCC9O60706 1549 aa31.56■■■□□ 2.64
HIGD1A-202ENST00000418900 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
HIGD1A-202ENST00000418900 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
HIGD1A-202ENST00000418900 DCAF8L2P0C7V8 631 aa29.83■■■□□ 2.37
HIGD1A-202ENST00000418900 NACADO15069 1562 aa29.73■■■□□ 2.35
HIGD1A-202ENST00000418900 DNAJC5BQ9UF47 199 aa29.71■■■□□ 2.35
HIGD1A-202ENST00000418900 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
HIGD1A-202ENST00000418900 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
HIGD1A-202ENST00000418900 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
HIGD1A-202ENST00000418900 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
HIGD1A-202ENST00000418900 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
HIGD1A-202ENST00000418900 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.24
HIGD1A-202ENST00000418900 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.22
HIGD1A-202ENST00000418900 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
HIGD1A-202ENST00000418900 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
HIGD1A-202ENST00000418900 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
HIGD1A-202ENST00000418900 CECR2Q9BXF3 1484 aa28.41■■■□□ 2.14
HIGD1A-202ENST00000418900 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
HIGD1A-202ENST00000418900 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.11
HIGD1A-202ENST00000418900 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
HIGD1A-202ENST00000418900 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
HIGD1A-202ENST00000418900 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
HIGD1A-202ENST00000418900 SMARCA2P51531 1590 aa27.29■■□□□ 1.96
HIGD1A-202ENST00000418900 DNAJC5Q9H3Z4 198 aa27.28■■□□□ 1.96
HIGD1A-202ENST00000418900 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
HIGD1A-202ENST00000418900 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
HIGD1A-202ENST00000418900 BAZ1AQ9NRL2 1556 aaPredicted RBP27.19■■□□□ 1.94
HIGD1A-202ENST00000418900 CUX2O14529 1486 aa27.14■■□□□ 1.94
HIGD1A-202ENST00000418900 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
HIGD1A-202ENST00000418900 NESP48681 1621 aa27.1■■□□□ 1.93
HIGD1A-202ENST00000418900 MROH2BQ7Z745 1585 aa27.04■■□□□ 1.92
HIGD1A-202ENST00000418900 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
HIGD1A-202ENST00000418900 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
HIGD1A-202ENST00000418900 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
HIGD1A-202ENST00000418900 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
HIGD1A-202ENST00000418900 WIZO95785 1651 aa26.7■■□□□ 1.86
HIGD1A-202ENST00000418900 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
HIGD1A-202ENST00000418900 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
HIGD1A-202ENST00000418900 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
HIGD1A-202ENST00000418900 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
HIGD1A-202ENST00000418900 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
HIGD1A-202ENST00000418900 WDR62O43379 1518 aa26.37■■□□□ 1.81
HIGD1A-202ENST00000418900 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
HIGD1A-202ENST00000418900 CFTRP13569 1480 aa26.33■■□□□ 1.81
HIGD1A-202ENST00000418900 TOP2AP11388 1531 aaKnown RBP26.32■■□□□ 1.8
HIGD1A-202ENST00000418900 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
HIGD1A-202ENST00000418900 TRIM41Q8WV44 630 aa26.14■■□□□ 1.77
HIGD1A-202ENST00000418900 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
HIGD1A-202ENST00000418900 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
HIGD1A-202ENST00000418900 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
HIGD1A-202ENST00000418900 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
HIGD1A-202ENST00000418900 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
HIGD1A-202ENST00000418900 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
HIGD1A-202ENST00000418900 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
HIGD1A-202ENST00000418900 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
HIGD1A-202ENST00000418900 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.73e-7■■■□□ 16.1
HIGD1A-202ENST00000418900 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
HIGD1A-202ENST00000418900 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
HIGD1A-202ENST00000418900 RIMBP3CA6NJZ7 1639 aa25.58■■□□□ 1.69
HIGD1A-202ENST00000418900 RIMBP3BA6NNM3 1639 aa25.58■■□□□ 1.69
HIGD1A-202ENST00000418900 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
HIGD1A-202ENST00000418900 RIMBP3Q9UFD9 1639 aa25.58■■□□□ 1.69
HIGD1A-202ENST00000418900 FBLN2P98095 1184 aa25.57■■□□□ 1.68
HIGD1A-202ENST00000418900 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
HIGD1A-202ENST00000418900 SOGA1O94964 1423 aa25.53■■□□□ 1.68
HIGD1A-202ENST00000418900 ARHGEF11O15085 1522 aa25.5■■□□□ 1.67
HIGD1A-202ENST00000418900 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
HIGD1A-202ENST00000418900 CYB5RLQ6IPT4 315 aa25.46■■□□□ 1.67
HIGD1A-202ENST00000418900 SUPT5HO00267 1087 aaKnown RBP25.44■■□□□ 1.66
HIGD1A-202ENST00000418900 CHD1O14646 1710 aa25.44■■□□□ 1.66
HIGD1A-202ENST00000418900 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
HIGD1A-202ENST00000418900 CUX1P39880 1505 aa25.39■■□□□ 1.66
HIGD1A-202ENST00000418900 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
HIGD1A-202ENST00000418900 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
HIGD1A-202ENST00000418900 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
HIGD1A-202ENST00000418900 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
HIGD1A-202ENST00000418900 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
HIGD1A-202ENST00000418900 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
HIGD1A-202ENST00000418900 TRHP20396 242 aaPredicted RBP25.2■■□□□ 1.62
HIGD1A-202ENST00000418900 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
HIGD1A-202ENST00000418900 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
HIGD1A-202ENST00000418900 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
HIGD1A-202ENST00000418900 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
HIGD1A-202ENST00000418900 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
HIGD1A-202ENST00000418900 SENP3Q9H4L4 574 aaPredicted RBP25.1■■□□□ 1.61
HIGD1A-202ENST00000418900 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
HIGD1A-202ENST00000418900 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
HIGD1A-202ENST00000418900 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
HIGD1A-202ENST00000418900 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
HIGD1A-202ENST00000418900 BIVM-ERCC5R4GMW8 1640 aa24.92■■□□□ 1.58
HIGD1A-202ENST00000418900 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
HIGD1A-202ENST00000418900 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
HIGD1A-202ENST00000418900 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
HIGD1A-202ENST00000418900 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
HIGD1A-202ENST00000418900 NUP160Q12769 1436 aa24.83■■□□□ 1.57
HIGD1A-202ENST00000418900 CEP170Q5SW79 1584 aa24.82■■□□□ 1.56
HIGD1A-202ENST00000418900 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
HIGD1A-202ENST00000418900 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
HIGD1A-202ENST00000418900 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms