RNA–Protein interactions for RNA: ENST00000445368.1

PUDPP3-201, Transcript of pseudouridine 5'-phosphatase pseudogene 3, humanhuman

BASIC

Gene PUDPP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP3-201ENST00000445368 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
PUDPP3-201ENST00000445368 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
PUDPP3-201ENST00000445368 ABCC9O60706 1549 aa30.86■■■□□ 2.53
PUDPP3-201ENST00000445368 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
PUDPP3-201ENST00000445368 NACADO15069 1562 aa29.59■■■□□ 2.33
PUDPP3-201ENST00000445368 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
PUDPP3-201ENST00000445368 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
PUDPP3-201ENST00000445368 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
PUDPP3-201ENST00000445368 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PUDPP3-201ENST00000445368 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
PUDPP3-201ENST00000445368 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
PUDPP3-201ENST00000445368 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
PUDPP3-201ENST00000445368 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
PUDPP3-201ENST00000445368 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
PUDPP3-201ENST00000445368 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
PUDPP3-201ENST00000445368 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
PUDPP3-201ENST00000445368 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
PUDPP3-201ENST00000445368 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
PUDPP3-201ENST00000445368 NCAPD3P42695 1498 aa27.42■■□□□ 1.98
PUDPP3-201ENST00000445368 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
PUDPP3-201ENST00000445368 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
PUDPP3-201ENST00000445368 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
PUDPP3-201ENST00000445368 SMARCA2P51531 1590 aa27.25■■□□□ 1.95
PUDPP3-201ENST00000445368 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
PUDPP3-201ENST00000445368 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
PUDPP3-201ENST00000445368 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
PUDPP3-201ENST00000445368 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
PUDPP3-201ENST00000445368 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.9
PUDPP3-201ENST00000445368 WIZO95785 1651 aa26.76■■□□□ 1.87
PUDPP3-201ENST00000445368 NESP48681 1621 aa26.65■■□□□ 1.86
PUDPP3-201ENST00000445368 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
PUDPP3-201ENST00000445368 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
PUDPP3-201ENST00000445368 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
PUDPP3-201ENST00000445368 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
PUDPP3-201ENST00000445368 PDS5BQ9NTI5 1447 aa26.54■■□□□ 1.84
PUDPP3-201ENST00000445368 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
PUDPP3-201ENST00000445368 CUX2O14529 1486 aa26.42■■□□□ 1.82
PUDPP3-201ENST00000445368 CFTRP13569 1480 aa26.4■■□□□ 1.82
PUDPP3-201ENST00000445368 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
PUDPP3-201ENST00000445368 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
PUDPP3-201ENST00000445368 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
PUDPP3-201ENST00000445368 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
PUDPP3-201ENST00000445368 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
PUDPP3-201ENST00000445368 KIF21AQ7Z4S6 1674 aa26.08■■□□□ 1.77
PUDPP3-201ENST00000445368 WDR62O43379 1518 aa26.04■■□□□ 1.76
PUDPP3-201ENST00000445368 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
PUDPP3-201ENST00000445368 DNAJC5Q9H3Z4 198 aa25.89■■□□□ 1.74
PUDPP3-201ENST00000445368 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
PUDPP3-201ENST00000445368 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
PUDPP3-201ENST00000445368 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
PUDPP3-201ENST00000445368 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
PUDPP3-201ENST00000445368 DNMBPQ6XZF7 1577 aa25.67■■□□□ 1.7
PUDPP3-201ENST00000445368 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
PUDPP3-201ENST00000445368 SOGA1O94964 1423 aa25.54■■□□□ 1.68
PUDPP3-201ENST00000445368 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
PUDPP3-201ENST00000445368 CUX1P39880 1505 aa25.51■■□□□ 1.67
PUDPP3-201ENST00000445368 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
PUDPP3-201ENST00000445368 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
PUDPP3-201ENST00000445368 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
PUDPP3-201ENST00000445368 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.66
PUDPP3-201ENST00000445368 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
PUDPP3-201ENST00000445368 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
PUDPP3-201ENST00000445368 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
PUDPP3-201ENST00000445368 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
PUDPP3-201ENST00000445368 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
PUDPP3-201ENST00000445368 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
PUDPP3-201ENST00000445368 TOP2BQ02880 1626 aa25.21■■□□□ 1.63
PUDPP3-201ENST00000445368 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
PUDPP3-201ENST00000445368 FBLN2P98095 1184 aa25.19■■□□□ 1.62
PUDPP3-201ENST00000445368 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
PUDPP3-201ENST00000445368 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
PUDPP3-201ENST00000445368 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
PUDPP3-201ENST00000445368 SNAPC4Q5SXM2 1469 aa25.13■■□□□ 1.61
PUDPP3-201ENST00000445368 MAGI1Q96QZ7 1491 aaPredicted RBP25.13■■□□□ 1.61
PUDPP3-201ENST00000445368 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
PUDPP3-201ENST00000445368 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
PUDPP3-201ENST00000445368 SYNJ2O15056 1496 aa25.03■■□□□ 1.6
PUDPP3-201ENST00000445368 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
PUDPP3-201ENST00000445368 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
PUDPP3-201ENST00000445368 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
PUDPP3-201ENST00000445368 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
PUDPP3-201ENST00000445368 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
PUDPP3-201ENST00000445368 IGF1RP08069 1367 aa24.88■■□□□ 1.57
PUDPP3-201ENST00000445368 CHD1O14646 1710 aa24.83■■□□□ 1.57
PUDPP3-201ENST00000445368 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
PUDPP3-201ENST00000445368 ARHGEF11O15085 1522 aa24.83■■□□□ 1.57
PUDPP3-201ENST00000445368 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
PUDPP3-201ENST00000445368 NUP160Q12769 1436 aa24.79■■□□□ 1.56
PUDPP3-201ENST00000445368 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
PUDPP3-201ENST00000445368 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
PUDPP3-201ENST00000445368 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
PUDPP3-201ENST00000445368 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
PUDPP3-201ENST00000445368 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
PUDPP3-201ENST00000445368 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
PUDPP3-201ENST00000445368 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
PUDPP3-201ENST00000445368 JPH4Q96JJ6 628 aa24.66■■□□□ 1.54
PUDPP3-201ENST00000445368 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
PUDPP3-201ENST00000445368 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
PUDPP3-201ENST00000445368 EEA1Q15075 1411 aa24.61■■□□□ 1.53
PUDPP3-201ENST00000445368 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms