RNA–Protein interactions for RNA: ENST00000340978.7

PDE8B-203, Transcript of phosphodiesterase 8B, humanhuman

TSL 1 (best) BASIC

Gene PDE8B, Length 3,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-203ENST00000340978 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
PDE8B-203ENST00000340978 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
PDE8B-203ENST00000340978 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
PDE8B-203ENST00000340978 ABCC9O60706 1549 aa28.18■■■□□ 2.1
PDE8B-203ENST00000340978 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
PDE8B-203ENST00000340978 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
PDE8B-203ENST00000340978 SCRIBQ14160 1630 aa26.92■■□□□ 1.9
PDE8B-203ENST00000340978 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
PDE8B-203ENST00000340978 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
PDE8B-203ENST00000340978 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
PDE8B-203ENST00000340978 NACADO15069 1562 aa26.76■■□□□ 1.87
PDE8B-203ENST00000340978 RB1CC1Q8TDY2 1594 aa26.72■■□□□ 1.87
PDE8B-203ENST00000340978 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
PDE8B-203ENST00000340978 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
PDE8B-203ENST00000340978 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
PDE8B-203ENST00000340978 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
PDE8B-203ENST00000340978 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
PDE8B-203ENST00000340978 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
PDE8B-203ENST00000340978 WIZO95785 1651 aa25.54■■□□□ 1.68
PDE8B-203ENST00000340978 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
PDE8B-203ENST00000340978 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
PDE8B-203ENST00000340978 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
PDE8B-203ENST00000340978 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.64
PDE8B-203ENST00000340978 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
PDE8B-203ENST00000340978 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
PDE8B-203ENST00000340978 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
PDE8B-203ENST00000340978 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
PDE8B-203ENST00000340978 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
PDE8B-203ENST00000340978 EHMT2Q96KQ7 1210 aa24.99■■□□□ 1.59
PDE8B-203ENST00000340978 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
PDE8B-203ENST00000340978 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
PDE8B-203ENST00000340978 FAM9AQ8IZU1 332 aaPredicted RBP24.91■■□□□ 1.58
PDE8B-203ENST00000340978 NCAPD3P42695 1498 aa24.86■■□□□ 1.57
PDE8B-203ENST00000340978 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
PDE8B-203ENST00000340978 PEG3Q9GZU2 1588 aa24.79■■□□□ 1.56
PDE8B-203ENST00000340978 ABCC8Q09428 1581 aa24.64■■□□□ 1.53
PDE8B-203ENST00000340978 NESP48681 1621 aa24.63■■□□□ 1.53
PDE8B-203ENST00000340978 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
PDE8B-203ENST00000340978 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
PDE8B-203ENST00000340978 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
PDE8B-203ENST00000340978 CFTRP13569 1480 aa24.32■■□□□ 1.48
PDE8B-203ENST00000340978 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
PDE8B-203ENST00000340978 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
PDE8B-203ENST00000340978 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
PDE8B-203ENST00000340978 SOGA1O94964 1423 aa24.19■■□□□ 1.46
PDE8B-203ENST00000340978 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
PDE8B-203ENST00000340978 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
PDE8B-203ENST00000340978 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
PDE8B-203ENST00000340978 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
PDE8B-203ENST00000340978 CUX1P39880 1505 aa24.05■■□□□ 1.44
PDE8B-203ENST00000340978 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
PDE8B-203ENST00000340978 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
PDE8B-203ENST00000340978 RAD54L2Q9Y4B4 1467 aa23.96■■□□□ 1.43
PDE8B-203ENST00000340978 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.42
PDE8B-203ENST00000340978 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
PDE8B-203ENST00000340978 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
PDE8B-203ENST00000340978 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
PDE8B-203ENST00000340978 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
PDE8B-203ENST00000340978 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
PDE8B-203ENST00000340978 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
PDE8B-203ENST00000340978 CUX2O14529 1486 aa23.83■■□□□ 1.41
PDE8B-203ENST00000340978 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
PDE8B-203ENST00000340978 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
PDE8B-203ENST00000340978 PPARGC1BQ86YN6 1023 aaKnown RBP23.77■■□□□ 1.4
PDE8B-203ENST00000340978 TTBK1Q5TCY1 1321 aaPredicted RBP23.75■■□□□ 1.39
PDE8B-203ENST00000340978 FBLN2P98095 1184 aa23.74■■□□□ 1.39
PDE8B-203ENST00000340978 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
PDE8B-203ENST00000340978 PRDM2Q13029 1718 aa23.69■■□□□ 1.38
PDE8B-203ENST00000340978 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
PDE8B-203ENST00000340978 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
PDE8B-203ENST00000340978 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
PDE8B-203ENST00000340978 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
PDE8B-203ENST00000340978 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
PDE8B-203ENST00000340978 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
PDE8B-203ENST00000340978 P3H3Q8IVL6 736 aa23.58■■□□□ 1.37
PDE8B-203ENST00000340978 IGF1RP08069 1367 aa23.57■■□□□ 1.36
PDE8B-203ENST00000340978 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
PDE8B-203ENST00000340978 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
PDE8B-203ENST00000340978 EEA1Q15075 1411 aa23.45■■□□□ 1.34
PDE8B-203ENST00000340978 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
PDE8B-203ENST00000340978 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
PDE8B-203ENST00000340978 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
PDE8B-203ENST00000340978 WDR62O43379 1518 aa23.41■■□□□ 1.34
PDE8B-203ENST00000340978 GOLGA3Q08378 1498 aa23.4■■□□□ 1.34
PDE8B-203ENST00000340978 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
PDE8B-203ENST00000340978 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
PDE8B-203ENST00000340978 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
PDE8B-203ENST00000340978 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
PDE8B-203ENST00000340978 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
PDE8B-203ENST00000340978 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
PDE8B-203ENST00000340978 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
PDE8B-203ENST00000340978 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
PDE8B-203ENST00000340978 CLIP1P30622 1438 aa23.23■■□□□ 1.31
PDE8B-203ENST00000340978 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
PDE8B-203ENST00000340978 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
PDE8B-203ENST00000340978 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
PDE8B-203ENST00000340978 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
PDE8B-203ENST00000340978 KIF21BO75037 1637 aa23.14■■□□□ 1.3
PDE8B-203ENST00000340978 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
PDE8B-203ENST00000340978 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms