RNA–Protein interactions for RNA: ENST00000278568.8

PAK1-201, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 2 BASIC

Gene PAK1, Length 2,543 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-201ENST00000278568 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
PAK1-201ENST00000278568 CCDC180Q9P1Z9 1646 aa28.98■■■□□ 2.23
PAK1-201ENST00000278568 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
PAK1-201ENST00000278568 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
PAK1-201ENST00000278568 ABCC9O60706 1549 aa27.73■■■□□ 2.03
PAK1-201ENST00000278568 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
PAK1-201ENST00000278568 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
PAK1-201ENST00000278568 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
PAK1-201ENST00000278568 NACADO15069 1562 aa27.05■■□□□ 1.92
PAK1-201ENST00000278568 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
PAK1-201ENST00000278568 RB1CC1Q8TDY2 1594 aa26.85■■□□□ 1.89
PAK1-201ENST00000278568 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.84
PAK1-201ENST00000278568 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
PAK1-201ENST00000278568 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PAK1-201ENST00000278568 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
PAK1-201ENST00000278568 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
PAK1-201ENST00000278568 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
PAK1-201ENST00000278568 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
PAK1-201ENST00000278568 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
PAK1-201ENST00000278568 WIZO95785 1651 aa25.69■■□□□ 1.7
PAK1-201ENST00000278568 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
PAK1-201ENST00000278568 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
PAK1-201ENST00000278568 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
PAK1-201ENST00000278568 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
PAK1-201ENST00000278568 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
PAK1-201ENST00000278568 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
PAK1-201ENST00000278568 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
PAK1-201ENST00000278568 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
PAK1-201ENST00000278568 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
PAK1-201ENST00000278568 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
PAK1-201ENST00000278568 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
PAK1-201ENST00000278568 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
PAK1-201ENST00000278568 TRIM41Q8WV44 630 aa24.82■■□□□ 1.56
PAK1-201ENST00000278568 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
PAK1-201ENST00000278568 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.53
PAK1-201ENST00000278568 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
PAK1-201ENST00000278568 CFTRP13569 1480 aa24.5■■□□□ 1.51
PAK1-201ENST00000278568 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
PAK1-201ENST00000278568 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
PAK1-201ENST00000278568 LOC105371045A0A1W2PR82 267 aa24.43■■□□□ 1.5
PAK1-201ENST00000278568 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
PAK1-201ENST00000278568 NESP48681 1621 aa24.36■■□□□ 1.49
PAK1-201ENST00000278568 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
PAK1-201ENST00000278568 SOGA1O94964 1423 aa24.26■■□□□ 1.47
PAK1-201ENST00000278568 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
PAK1-201ENST00000278568 CUX1P39880 1505 aa24.2■■□□□ 1.46
PAK1-201ENST00000278568 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.46
PAK1-201ENST00000278568 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
PAK1-201ENST00000278568 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
PAK1-201ENST00000278568 LAMC3Q9Y6N6 1575 aa24.14■■□□□ 1.45
PAK1-201ENST00000278568 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
PAK1-201ENST00000278568 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
PAK1-201ENST00000278568 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
PAK1-201ENST00000278568 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
PAK1-201ENST00000278568 EEA1Q15075 1411 aa23.97■■□□□ 1.43
PAK1-201ENST00000278568 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
PAK1-201ENST00000278568 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
PAK1-201ENST00000278568 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
PAK1-201ENST00000278568 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
PAK1-201ENST00000278568 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
PAK1-201ENST00000278568 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
PAK1-201ENST00000278568 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.4
PAK1-201ENST00000278568 CUX2O14529 1486 aa23.81■■□□□ 1.4
PAK1-201ENST00000278568 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
PAK1-201ENST00000278568 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
PAK1-201ENST00000278568 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
PAK1-201ENST00000278568 RAPGEF2Q9Y4G8 1499 aa23.73■■□□□ 1.39
PAK1-201ENST00000278568 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
PAK1-201ENST00000278568 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
PAK1-201ENST00000278568 KIF21BO75037 1637 aa23.69■■□□□ 1.38
PAK1-201ENST00000278568 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
PAK1-201ENST00000278568 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
PAK1-201ENST00000278568 IGF1RP08069 1367 aa23.65■■□□□ 1.38
PAK1-201ENST00000278568 PRXQ9BXM0 1461 aa23.65■■□□□ 1.38
PAK1-201ENST00000278568 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
PAK1-201ENST00000278568 CEP162Q5TB80 1403 aa23.62■■□□□ 1.37
PAK1-201ENST00000278568 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
PAK1-201ENST00000278568 WDR62O43379 1518 aa23.56■■□□□ 1.36
PAK1-201ENST00000278568 CARMIL1Q5VZK9 1371 aa23.53■■□□□ 1.36
PAK1-201ENST00000278568 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
PAK1-201ENST00000278568 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
PAK1-201ENST00000278568 TARBP1Q13395 1621 aaKnown RBP23.52■■□□□ 1.36
PAK1-201ENST00000278568 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
PAK1-201ENST00000278568 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
PAK1-201ENST00000278568 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.35
PAK1-201ENST00000278568 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.35
PAK1-201ENST00000278568 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
PAK1-201ENST00000278568 CLIP1P30622 1438 aa23.43■■□□□ 1.34
PAK1-201ENST00000278568 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
PAK1-201ENST00000278568 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
PAK1-201ENST00000278568 CUL7Q14999 1698 aa23.32■■□□□ 1.32
PAK1-201ENST00000278568 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
PAK1-201ENST00000278568 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
PAK1-201ENST00000278568 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
PAK1-201ENST00000278568 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
PAK1-201ENST00000278568 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
PAK1-201ENST00000278568 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
PAK1-201ENST00000278568 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
PAK1-201ENST00000278568 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
PAK1-201ENST00000278568 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms