RNA–Protein interactions for RNA: ENST00000348227.4

WDR54-201, Transcript of WD repeat domain 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR54, Length 1,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR54-201ENST00000348227 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
WDR54-201ENST00000348227 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
WDR54-201ENST00000348227 ABCC9O60706 1549 aa31.07■■■□□ 2.56
WDR54-201ENST00000348227 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
WDR54-201ENST00000348227 NACADO15069 1562 aa30.13■■■□□ 2.41
WDR54-201ENST00000348227 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
WDR54-201ENST00000348227 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
WDR54-201ENST00000348227 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
WDR54-201ENST00000348227 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
WDR54-201ENST00000348227 UNC13AQ9UPW8 1703 aa29.69■■■□□ 2.34
WDR54-201ENST00000348227 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
WDR54-201ENST00000348227 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
WDR54-201ENST00000348227 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.22
WDR54-201ENST00000348227 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
WDR54-201ENST00000348227 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
WDR54-201ENST00000348227 CC2D2AQ9P2K1 1620 aa28.22■■■□□ 2.11
WDR54-201ENST00000348227 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
WDR54-201ENST00000348227 SMARCA4P51532 1647 aa28.19■■■□□ 2.1
WDR54-201ENST00000348227 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
WDR54-201ENST00000348227 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
WDR54-201ENST00000348227 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
WDR54-201ENST00000348227 PEG3Q9GZU2 1588 aa27.92■■■□□ 2.06
WDR54-201ENST00000348227 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
WDR54-201ENST00000348227 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
WDR54-201ENST00000348227 WIZO95785 1651 aa27.78■■■□□ 2.04
WDR54-201ENST00000348227 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
WDR54-201ENST00000348227 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
WDR54-201ENST00000348227 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
WDR54-201ENST00000348227 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
WDR54-201ENST00000348227 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
WDR54-201ENST00000348227 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
WDR54-201ENST00000348227 NESP48681 1621 aa27.04■■□□□ 1.92
WDR54-201ENST00000348227 CCDC88BA6NC98 1476 aa27.02■■□□□ 1.92
WDR54-201ENST00000348227 PRDM2Q13029 1718 aa27.01■■□□□ 1.91
WDR54-201ENST00000348227 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
WDR54-201ENST00000348227 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
WDR54-201ENST00000348227 CFTRP13569 1480 aa26.87■■□□□ 1.89
WDR54-201ENST00000348227 CADPSQ9ULU8 1353 aa26.86■■□□□ 1.89
WDR54-201ENST00000348227 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
WDR54-201ENST00000348227 ERCC6Q03468 1493 aa26.69■■□□□ 1.86
WDR54-201ENST00000348227 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
WDR54-201ENST00000348227 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
WDR54-201ENST00000348227 CEP164Q9UPV0 1460 aa26.61■■□□□ 1.85
WDR54-201ENST00000348227 WDR62O43379 1518 aa26.51■■□□□ 1.83
WDR54-201ENST00000348227 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
WDR54-201ENST00000348227 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
WDR54-201ENST00000348227 CUX2O14529 1486 aa26.38■■□□□ 1.81
WDR54-201ENST00000348227 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
WDR54-201ENST00000348227 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
WDR54-201ENST00000348227 CUX1P39880 1505 aa26.27■■□□□ 1.8
WDR54-201ENST00000348227 ABCC8Q09428 1581 aa26.25■■□□□ 1.79
WDR54-201ENST00000348227 BIVM-ERCC5R4GMW8 1640 aa26.22■■□□□ 1.79
WDR54-201ENST00000348227 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
WDR54-201ENST00000348227 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
WDR54-201ENST00000348227 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
WDR54-201ENST00000348227 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
WDR54-201ENST00000348227 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
WDR54-201ENST00000348227 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
WDR54-201ENST00000348227 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
WDR54-201ENST00000348227 IFT140Q96RY7 1462 aa25.99■■□□□ 1.75
WDR54-201ENST00000348227 EIF4G3O43432 1585 aaKnown RBP25.96■■□□□ 1.75
WDR54-201ENST00000348227 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
WDR54-201ENST00000348227 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
WDR54-201ENST00000348227 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
WDR54-201ENST00000348227 SOGA1O94964 1423 aa25.84■■□□□ 1.73
WDR54-201ENST00000348227 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
WDR54-201ENST00000348227 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
WDR54-201ENST00000348227 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.71
WDR54-201ENST00000348227 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
WDR54-201ENST00000348227 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
WDR54-201ENST00000348227 CHD1O14646 1710 aa25.62■■□□□ 1.69
WDR54-201ENST00000348227 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
WDR54-201ENST00000348227 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
WDR54-201ENST00000348227 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
WDR54-201ENST00000348227 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
WDR54-201ENST00000348227 MAGI1Q96QZ7 1491 aaPredicted RBP25.53■■□□□ 1.68
WDR54-201ENST00000348227 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
WDR54-201ENST00000348227 CUL7Q14999 1698 aa25.46■■□□□ 1.67
WDR54-201ENST00000348227 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
WDR54-201ENST00000348227 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
WDR54-201ENST00000348227 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
WDR54-201ENST00000348227 SYNJ2O15056 1496 aa25.41■■□□□ 1.66
WDR54-201ENST00000348227 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.65
WDR54-201ENST00000348227 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
WDR54-201ENST00000348227 IGF1RP08069 1367 aa25.3■■□□□ 1.64
WDR54-201ENST00000348227 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
WDR54-201ENST00000348227 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
WDR54-201ENST00000348227 EEA1Q15075 1411 aa25.2■■□□□ 1.63
WDR54-201ENST00000348227 NUP160Q12769 1436 aa25.2■■□□□ 1.62
WDR54-201ENST00000348227 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
WDR54-201ENST00000348227 CARMIL1Q5VZK9 1371 aa25.14■■□□□ 1.61
WDR54-201ENST00000348227 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
WDR54-201ENST00000348227 KIF21BO75037 1637 aa25.12■■□□□ 1.61
WDR54-201ENST00000348227 FBLN2P98095 1184 aa25.12■■□□□ 1.61
WDR54-201ENST00000348227 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
WDR54-201ENST00000348227 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
WDR54-201ENST00000348227 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
WDR54-201ENST00000348227 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
WDR54-201ENST00000348227 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
WDR54-201ENST00000348227 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms