Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CPNE6O95741 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.21□□□□□ -0.14
CPNE6O95741 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.21□□□□□ -0.14
CPNE6O95741 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.21□□□□□ -0.14
CPNE6O95741 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CPNE6O95741 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CPNE6O95741 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CPNE6O95741 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CPNE6O95741 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CPNE6O95741 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.2□□□□□ -0.14
CPNE6O95741 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.2□□□□□ -0.14
CPNE6O95741 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
CPNE6O95741 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 CR383656.2-201ENST00000548656 2254 ntBASIC14.2□□□□□ -0.14
CPNE6O95741 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 AC078875.1-201ENST00000431907 724 ntBASIC14.2□□□□□ -0.14
CPNE6O95741 AL157407.1-201ENST00000435784 904 ntBASIC14.2□□□□□ -0.14
CPNE6O95741 AC234782.1-201ENST00000451950 919 ntBASIC14.2□□□□□ -0.14
CPNE6O95741 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.2□□□□□ -0.14
CPNE6O95741 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CPNE6O95741 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.2□□□□□ -0.14
CPNE6O95741 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.2□□□□□ -0.14
CPNE6O95741 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CPNE6O95741 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CPNE6O95741 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
CPNE6O95741 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPNE6O95741 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CPNE6O95741 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.19□□□□□ -0.14
CPNE6O95741 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.19□□□□□ -0.14
CPNE6O95741 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 POU5F1P2-201ENST00000521750 823 ntBASIC14.19□□□□□ -0.14
CPNE6O95741 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.19□□□□□ -0.14
CPNE6O95741 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.19□□□□□ -0.14
CPNE6O95741 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CPNE6O95741 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE6O95741 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE6O95741 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms