RNA–Protein interactions for RNA: ENST00000264728.8

TMEM40-201, Transcript of transmembrane protein 40, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TMEM40, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-201ENST00000264728 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.29
TMEM40-201ENST00000264728 CCDC180Q9P1Z9 1646 aa32.12■■■□□ 2.73
TMEM40-201ENST00000264728 ABCC9O60706 1549 aa31.98■■■□□ 2.71
TMEM40-201ENST00000264728 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
TMEM40-201ENST00000264728 NACADO15069 1562 aa30.28■■■□□ 2.44
TMEM40-201ENST00000264728 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
TMEM40-201ENST00000264728 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
TMEM40-201ENST00000264728 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
TMEM40-201ENST00000264728 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
TMEM40-201ENST00000264728 PABPN1Q86U42 306 aaKnown RBP eCLIP29.66■■■□□ 2.34
TMEM40-201ENST00000264728 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
TMEM40-201ENST00000264728 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
TMEM40-201ENST00000264728 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
TMEM40-201ENST00000264728 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
TMEM40-201ENST00000264728 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
TMEM40-201ENST00000264728 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
TMEM40-201ENST00000264728 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
TMEM40-201ENST00000264728 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
TMEM40-201ENST00000264728 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
TMEM40-201ENST00000264728 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
TMEM40-201ENST00000264728 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
TMEM40-201ENST00000264728 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
TMEM40-201ENST00000264728 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
TMEM40-201ENST00000264728 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
TMEM40-201ENST00000264728 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
TMEM40-201ENST00000264728 CUX2O14529 1486 aa27.65■■■□□ 2.02
TMEM40-201ENST00000264728 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
TMEM40-201ENST00000264728 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
TMEM40-201ENST00000264728 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
TMEM40-201ENST00000264728 NESP48681 1621 aa27.43■■□□□ 1.98
TMEM40-201ENST00000264728 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
TMEM40-201ENST00000264728 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
TMEM40-201ENST00000264728 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
TMEM40-201ENST00000264728 KIF21AQ7Z4S6 1674 aa27.25■■□□□ 1.95
TMEM40-201ENST00000264728 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
TMEM40-201ENST00000264728 WIZO95785 1651 aa27.13■■□□□ 1.93
TMEM40-201ENST00000264728 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
TMEM40-201ENST00000264728 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
TMEM40-201ENST00000264728 WDR62O43379 1518 aa26.88■■□□□ 1.89
TMEM40-201ENST00000264728 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
TMEM40-201ENST00000264728 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
TMEM40-201ENST00000264728 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
TMEM40-201ENST00000264728 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
TMEM40-201ENST00000264728 PRDM2Q13029 1718 aa26.71■■□□□ 1.87
TMEM40-201ENST00000264728 CFTRP13569 1480 aa26.7■■□□□ 1.87
TMEM40-201ENST00000264728 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
TMEM40-201ENST00000264728 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
TMEM40-201ENST00000264728 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
TMEM40-201ENST00000264728 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
TMEM40-201ENST00000264728 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
TMEM40-201ENST00000264728 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
TMEM40-201ENST00000264728 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
TMEM40-201ENST00000264728 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
TMEM40-201ENST00000264728 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
TMEM40-201ENST00000264728 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
TMEM40-201ENST00000264728 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
TMEM40-201ENST00000264728 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
TMEM40-201ENST00000264728 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
TMEM40-201ENST00000264728 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
TMEM40-201ENST00000264728 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
TMEM40-201ENST00000264728 CHD1O14646 1710 aa26.02■■□□□ 1.76
TMEM40-201ENST00000264728 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
TMEM40-201ENST00000264728 ARHGEF11O15085 1522 aa25.94■■□□□ 1.74
TMEM40-201ENST00000264728 AQRO60306 1485 aaKnown RBP eCLIP25.9■■□□□ 1.74
TMEM40-201ENST00000264728 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
TMEM40-201ENST00000264728 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
TMEM40-201ENST00000264728 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
TMEM40-201ENST00000264728 SOGA1O94964 1423 aa25.8■■□□□ 1.72
TMEM40-201ENST00000264728 FBLN2P98095 1184 aa25.76■■□□□ 1.71
TMEM40-201ENST00000264728 CUX1P39880 1505 aa25.76■■□□□ 1.71
TMEM40-201ENST00000264728 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
TMEM40-201ENST00000264728 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
TMEM40-201ENST00000264728 PBRM1Q86U86 1689 aa25.69■■□□□ 1.7
TMEM40-201ENST00000264728 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
TMEM40-201ENST00000264728 SYNJ1O43426 1573 aa25.67■■□□□ 1.7
TMEM40-201ENST00000264728 ARAP1Q96P48 1450 aa25.65■■□□□ 1.7
TMEM40-201ENST00000264728 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
TMEM40-201ENST00000264728 CYB5RLQ6IPT4 315 aa25.63■■□□□ 1.69
TMEM40-201ENST00000264728 CLASP1Q7Z460 1538 aa25.62■■□□□ 1.69
TMEM40-201ENST00000264728 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
TMEM40-201ENST00000264728 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
TMEM40-201ENST00000264728 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
TMEM40-201ENST00000264728 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
TMEM40-201ENST00000264728 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
TMEM40-201ENST00000264728 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
TMEM40-201ENST00000264728 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
TMEM40-201ENST00000264728 TOP2BQ02880 1626 aa25.4■■□□□ 1.66
TMEM40-201ENST00000264728 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
TMEM40-201ENST00000264728 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
TMEM40-201ENST00000264728 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
TMEM40-201ENST00000264728 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
TMEM40-201ENST00000264728 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
TMEM40-201ENST00000264728 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
TMEM40-201ENST00000264728 NUP160Q12769 1436 aa25.2■■□□□ 1.62
TMEM40-201ENST00000264728 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
TMEM40-201ENST00000264728 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
TMEM40-201ENST00000264728 RUSC2Q8N2Y8 1516 aa25.02■■□□□ 1.6
TMEM40-201ENST00000264728 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.58
TMEM40-201ENST00000264728 CUL7Q14999 1698 aa24.94■■□□□ 1.58
TMEM40-201ENST00000264728 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms