RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
UBE4B-203ENST00000377153 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
UBE4B-203ENST00000377153 ABCC9O60706 1549 aa30.13■■■□□ 2.41
UBE4B-203ENST00000377153 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
UBE4B-203ENST00000377153 ZCCHC6Q5VYS8 1495 aaKnown RBP29.14■■■□□ 2.26
UBE4B-203ENST00000377153 NACADO15069 1562 aa29.13■■■□□ 2.25
UBE4B-203ENST00000377153 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
UBE4B-203ENST00000377153 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
UBE4B-203ENST00000377153 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
UBE4B-203ENST00000377153 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
UBE4B-203ENST00000377153 SCRIBQ14160 1630 aa28.34■■■□□ 2.13
UBE4B-203ENST00000377153 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
UBE4B-203ENST00000377153 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
UBE4B-203ENST00000377153 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
UBE4B-203ENST00000377153 EIF4G1Q04637 1599 aaKnown RBP27.47■■□□□ 1.99
UBE4B-203ENST00000377153 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
UBE4B-203ENST00000377153 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
UBE4B-203ENST00000377153 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
UBE4B-203ENST00000377153 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
UBE4B-203ENST00000377153 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
UBE4B-203ENST00000377153 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
UBE4B-203ENST00000377153 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
UBE4B-203ENST00000377153 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
UBE4B-203ENST00000377153 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.89
UBE4B-203ENST00000377153 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
UBE4B-203ENST00000377153 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
UBE4B-203ENST00000377153 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.87
UBE4B-203ENST00000377153 WIZO95785 1651 aa26.66■■□□□ 1.86
UBE4B-203ENST00000377153 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
UBE4B-203ENST00000377153 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
UBE4B-203ENST00000377153 LAMC3Q9Y6N6 1575 aa26.17■■□□□ 1.78
UBE4B-203ENST00000377153 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
UBE4B-203ENST00000377153 NESP48681 1621 aa26.09■■□□□ 1.77
UBE4B-203ENST00000377153 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
UBE4B-203ENST00000377153 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
UBE4B-203ENST00000377153 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
UBE4B-203ENST00000377153 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
UBE4B-203ENST00000377153 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
UBE4B-203ENST00000377153 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
UBE4B-203ENST00000377153 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
UBE4B-203ENST00000377153 CFTRP13569 1480 aa25.91■■□□□ 1.74
UBE4B-203ENST00000377153 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
UBE4B-203ENST00000377153 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
UBE4B-203ENST00000377153 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
UBE4B-203ENST00000377153 CUX2O14529 1486 aa25.68■■□□□ 1.7
UBE4B-203ENST00000377153 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
UBE4B-203ENST00000377153 WDR62O43379 1518 aa25.6■■□□□ 1.69
UBE4B-203ENST00000377153 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
UBE4B-203ENST00000377153 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
UBE4B-203ENST00000377153 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
UBE4B-203ENST00000377153 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
UBE4B-203ENST00000377153 CUX1P39880 1505 aa25.23■■□□□ 1.63
UBE4B-203ENST00000377153 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
UBE4B-203ENST00000377153 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
UBE4B-203ENST00000377153 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
UBE4B-203ENST00000377153 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
UBE4B-203ENST00000377153 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
UBE4B-203ENST00000377153 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
UBE4B-203ENST00000377153 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
UBE4B-203ENST00000377153 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
UBE4B-203ENST00000377153 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
UBE4B-203ENST00000377153 SOGA1O94964 1423 aa25.03■■□□□ 1.6
UBE4B-203ENST00000377153 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
UBE4B-203ENST00000377153 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
UBE4B-203ENST00000377153 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
UBE4B-203ENST00000377153 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
UBE4B-203ENST00000377153 PBRM1Q86U86 1689 aa24.86■■□□□ 1.57
UBE4B-203ENST00000377153 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.57
UBE4B-203ENST00000377153 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
UBE4B-203ENST00000377153 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
UBE4B-203ENST00000377153 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
UBE4B-203ENST00000377153 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
UBE4B-203ENST00000377153 CHD1O14646 1710 aa24.72■■□□□ 1.55
UBE4B-203ENST00000377153 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
UBE4B-203ENST00000377153 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
UBE4B-203ENST00000377153 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
UBE4B-203ENST00000377153 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
UBE4B-203ENST00000377153 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
UBE4B-203ENST00000377153 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
UBE4B-203ENST00000377153 SYNJ2O15056 1496 aa24.6■■□□□ 1.53
UBE4B-203ENST00000377153 FBLN2P98095 1184 aa24.56■■□□□ 1.52
UBE4B-203ENST00000377153 OSCARQ8IYS5 282 aa24.55■■□□□ 1.52
UBE4B-203ENST00000377153 CUL7Q14999 1698 aa24.54■■□□□ 1.52
UBE4B-203ENST00000377153 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
UBE4B-203ENST00000377153 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
UBE4B-203ENST00000377153 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
UBE4B-203ENST00000377153 GRIN2AQ12879 1464 aa24.45■■□□□ 1.51
UBE4B-203ENST00000377153 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
UBE4B-203ENST00000377153 IGF1RP08069 1367 aa24.37■■□□□ 1.49
UBE4B-203ENST00000377153 CLASP1Q7Z460 1538 aa24.36■■□□□ 1.49
UBE4B-203ENST00000377153 RUSC2Q8N2Y8 1516 aa24.33■■□□□ 1.49
UBE4B-203ENST00000377153 CEP170Q5SW79 1584 aa24.33■■□□□ 1.48
UBE4B-203ENST00000377153 NUP160Q12769 1436 aa24.3■■□□□ 1.48
UBE4B-203ENST00000377153 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
UBE4B-203ENST00000377153 EEA1Q15075 1411 aa24.28■■□□□ 1.48
UBE4B-203ENST00000377153 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
UBE4B-203ENST00000377153 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
UBE4B-203ENST00000377153 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
UBE4B-203ENST00000377153 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
UBE4B-203ENST00000377153 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms