RNA–Protein interactions for RNA: ENST00000616194.4

LINC01517-203, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5 BASIC

Gene LINC01517, Length 908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-203ENST00000616194 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
LINC01517-203ENST00000616194 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
LINC01517-203ENST00000616194 ABCC9O60706 1549 aa31.29■■■□□ 2.6
LINC01517-203ENST00000616194 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
LINC01517-203ENST00000616194 NACADO15069 1562 aa29.87■■■□□ 2.37
LINC01517-203ENST00000616194 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
LINC01517-203ENST00000616194 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
LINC01517-203ENST00000616194 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
LINC01517-203ENST00000616194 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
LINC01517-203ENST00000616194 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
LINC01517-203ENST00000616194 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
LINC01517-203ENST00000616194 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
LINC01517-203ENST00000616194 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
LINC01517-203ENST00000616194 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
LINC01517-203ENST00000616194 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
LINC01517-203ENST00000616194 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
LINC01517-203ENST00000616194 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
LINC01517-203ENST00000616194 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
LINC01517-203ENST00000616194 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
LINC01517-203ENST00000616194 NCAPD3P42695 1498 aa27.58■■■□□ 2.01
LINC01517-203ENST00000616194 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
LINC01517-203ENST00000616194 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
LINC01517-203ENST00000616194 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
LINC01517-203ENST00000616194 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
LINC01517-203ENST00000616194 PEG3Q9GZU2 1588 aa27.37■■□□□ 1.97
LINC01517-203ENST00000616194 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
LINC01517-203ENST00000616194 BAZ1BQ9UIG0 1483 aaKnown RBP27.26■■□□□ 1.95
LINC01517-203ENST00000616194 WIZO95785 1651 aa27.05■■□□□ 1.92
LINC01517-203ENST00000616194 NESP48681 1621 aa27.01■■□□□ 1.91
LINC01517-203ENST00000616194 ERCC6Q03468 1493 aa26.95■■□□□ 1.91
LINC01517-203ENST00000616194 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
LINC01517-203ENST00000616194 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
LINC01517-203ENST00000616194 CUX2O14529 1486 aa26.83■■□□□ 1.89
LINC01517-203ENST00000616194 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
LINC01517-203ENST00000616194 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
LINC01517-203ENST00000616194 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
LINC01517-203ENST00000616194 KIF21AQ7Z4S6 1674 aa26.69■■□□□ 1.86
LINC01517-203ENST00000616194 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
LINC01517-203ENST00000616194 CFTRP13569 1480 aa26.53■■□□□ 1.84
LINC01517-203ENST00000616194 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
LINC01517-203ENST00000616194 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
LINC01517-203ENST00000616194 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
LINC01517-203ENST00000616194 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
LINC01517-203ENST00000616194 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
LINC01517-203ENST00000616194 WDR62O43379 1518 aa26.39■■□□□ 1.81
LINC01517-203ENST00000616194 PRDM2Q13029 1718 aa26.33■■□□□ 1.81
LINC01517-203ENST00000616194 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
LINC01517-203ENST00000616194 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
LINC01517-203ENST00000616194 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
LINC01517-203ENST00000616194 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
LINC01517-203ENST00000616194 DNMBPQ6XZF7 1577 aa25.92■■□□□ 1.74
LINC01517-203ENST00000616194 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
LINC01517-203ENST00000616194 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
LINC01517-203ENST00000616194 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
LINC01517-203ENST00000616194 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
LINC01517-203ENST00000616194 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
LINC01517-203ENST00000616194 CUX1P39880 1505 aa25.68■■□□□ 1.7
LINC01517-203ENST00000616194 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
LINC01517-203ENST00000616194 FGD5Q6ZNL6 1462 aa25.63■■□□□ 1.69
LINC01517-203ENST00000616194 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
LINC01517-203ENST00000616194 SOGA1O94964 1423 aa25.62■■□□□ 1.69
LINC01517-203ENST00000616194 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.69
LINC01517-203ENST00000616194 TDRD9Q8NDG6 1382 aaKnown RBP25.51■■□□□ 1.67
LINC01517-203ENST00000616194 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
LINC01517-203ENST00000616194 CHD1O14646 1710 aa25.44■■□□□ 1.66
LINC01517-203ENST00000616194 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
LINC01517-203ENST00000616194 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
LINC01517-203ENST00000616194 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
LINC01517-203ENST00000616194 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
LINC01517-203ENST00000616194 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
LINC01517-203ENST00000616194 GRIN2BQ13224 1484 aa25.35■■□□□ 1.65
LINC01517-203ENST00000616194 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
LINC01517-203ENST00000616194 MAGI1Q96QZ7 1491 aaPredicted RBP25.33■■□□□ 1.65
LINC01517-203ENST00000616194 FBLN2P98095 1184 aa25.32■■□□□ 1.64
LINC01517-203ENST00000616194 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
LINC01517-203ENST00000616194 GAPVD1Q14C86 1478 aa25.31■■□□□ 1.64
LINC01517-203ENST00000616194 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
LINC01517-203ENST00000616194 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
LINC01517-203ENST00000616194 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
LINC01517-203ENST00000616194 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
LINC01517-203ENST00000616194 PBRM1Q86U86 1689 aa25.3■■□□□ 1.64
LINC01517-203ENST00000616194 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
LINC01517-203ENST00000616194 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
LINC01517-203ENST00000616194 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
LINC01517-203ENST00000616194 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
LINC01517-203ENST00000616194 ADAMTS12P58397 1594 aa25.08■■□□□ 1.61
LINC01517-203ENST00000616194 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
LINC01517-203ENST00000616194 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
LINC01517-203ENST00000616194 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
LINC01517-203ENST00000616194 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
LINC01517-203ENST00000616194 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
LINC01517-203ENST00000616194 NUP160Q12769 1436 aa24.95■■□□□ 1.59
LINC01517-203ENST00000616194 CEP170Q5SW79 1584 aa24.94■■□□□ 1.58
LINC01517-203ENST00000616194 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
LINC01517-203ENST00000616194 IGF1RP08069 1367 aa24.82■■□□□ 1.56
LINC01517-203ENST00000616194 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
LINC01517-203ENST00000616194 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
LINC01517-203ENST00000616194 CUL7Q14999 1698 aa24.77■■□□□ 1.56
LINC01517-203ENST00000616194 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
LINC01517-203ENST00000616194 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms