RNA–Protein interactions for RNA: ENST00000622754.4

MINDY1-207, Transcript of MINDY lysine 48 deubiquitinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MINDY1, Length 2,637 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY1-207ENST00000622754 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
MINDY1-207ENST00000622754 HRCP23327 699 aa23.93■■□□□ 1.42
MINDY1-207ENST00000622754 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
MINDY1-207ENST00000622754 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
MINDY1-207ENST00000622754 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
MINDY1-207ENST00000622754 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
MINDY1-207ENST00000622754 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
MINDY1-207ENST00000622754 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
MINDY1-207ENST00000622754 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
MINDY1-207ENST00000622754 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.3
MINDY1-207ENST00000622754 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
MINDY1-207ENST00000622754 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
MINDY1-207ENST00000622754 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
MINDY1-207ENST00000622754 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
MINDY1-207ENST00000622754 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
MINDY1-207ENST00000622754 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
MINDY1-207ENST00000622754 ZEB1P37275 1124 aaPredicted RBP22.36■■□□□ 1.17
MINDY1-207ENST00000622754 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
MINDY1-207ENST00000622754 ACIN1Q9UKV3 1341 aaKnown RBP22.11■■□□□ 1.13
MINDY1-207ENST00000622754 ABCC9O60706 1549 aa22.08■■□□□ 1.12
MINDY1-207ENST00000622754 MYT1Q01538 1121 aa22.05■■□□□ 1.12
MINDY1-207ENST00000622754 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
MINDY1-207ENST00000622754 NACADO15069 1562 aa22.01■■□□□ 1.11
MINDY1-207ENST00000622754 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
MINDY1-207ENST00000622754 SCRIBQ14160 1630 aa22■■□□□ 1.11
MINDY1-207ENST00000622754 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
MINDY1-207ENST00000622754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.08
MINDY1-207ENST00000622754 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
MINDY1-207ENST00000622754 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
MINDY1-207ENST00000622754 DIEXFQ68CQ4 756 aaKnown RBP21.75■■□□□ 1.07
MINDY1-207ENST00000622754 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
MINDY1-207ENST00000622754 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
MINDY1-207ENST00000622754 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
MINDY1-207ENST00000622754 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
MINDY1-207ENST00000622754 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
MINDY1-207ENST00000622754 TTBK1Q5TCY1 1321 aaPredicted RBP21.48■■□□□ 1.03
MINDY1-207ENST00000622754 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
MINDY1-207ENST00000622754 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
MINDY1-207ENST00000622754 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
MINDY1-207ENST00000622754 WIZO95785 1651 aa21.26■□□□□ 0.99
MINDY1-207ENST00000622754 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
MINDY1-207ENST00000622754 MIER1Q8N108 512 aa21.22■□□□□ 0.99
MINDY1-207ENST00000622754 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
MINDY1-207ENST00000622754 BICRAQ9NZM4 1560 aa21.05■□□□□ 0.96
MINDY1-207ENST00000622754 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
MINDY1-207ENST00000622754 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
MINDY1-207ENST00000622754 BCL11AQ9H165 835 aa20.91■□□□□ 0.94
MINDY1-207ENST00000622754 SUPT16HQ9Y5B9 1047 aaKnown RBP20.89■□□□□ 0.93
MINDY1-207ENST00000622754 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
MINDY1-207ENST00000622754 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
MINDY1-207ENST00000622754 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
MINDY1-207ENST00000622754 EIF4G1Q04637 1599 aaKnown RBP20.84■□□□□ 0.93
MINDY1-207ENST00000622754 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
MINDY1-207ENST00000622754 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
MINDY1-207ENST00000622754 TSHZ2Q9NRE2 1034 aa20.81■□□□□ 0.92
MINDY1-207ENST00000622754 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
MINDY1-207ENST00000622754 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
MINDY1-207ENST00000622754 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
MINDY1-207ENST00000622754 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
MINDY1-207ENST00000622754 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
MINDY1-207ENST00000622754 BCANQ96GW7 911 aa20.62■□□□□ 0.89
MINDY1-207ENST00000622754 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
MINDY1-207ENST00000622754 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
MINDY1-207ENST00000622754 SOGA1O94964 1423 aa20.59■□□□□ 0.89
MINDY1-207ENST00000622754 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.88
MINDY1-207ENST00000622754 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
MINDY1-207ENST00000622754 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
MINDY1-207ENST00000622754 KCNH8Q96L42 1107 aa20.45■□□□□ 0.86
MINDY1-207ENST00000622754 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
MINDY1-207ENST00000622754 FKBP8Q14318 412 aa20.39■□□□□ 0.85
MINDY1-207ENST00000622754 EEA1Q15075 1411 aa20.38■□□□□ 0.85
MINDY1-207ENST00000622754 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
MINDY1-207ENST00000622754 APLP2Q06481 763 aa20.33■□□□□ 0.85
MINDY1-207ENST00000622754 GOLGA3Q08378 1498 aa20.33■□□□□ 0.84
MINDY1-207ENST00000622754 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
MINDY1-207ENST00000622754 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
MINDY1-207ENST00000622754 ITGAEP38570 1179 aa20.29■□□□□ 0.84
MINDY1-207ENST00000622754 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
MINDY1-207ENST00000622754 SYNJ1O43426 1573 aa20.27■□□□□ 0.83
MINDY1-207ENST00000622754 CLIP1P30622 1438 aa20.24■□□□□ 0.83
MINDY1-207ENST00000622754 VPS8Q8N3P4 1428 aa20.17■□□□□ 0.82
MINDY1-207ENST00000622754 MSH5O43196 834 aa20.17■□□□□ 0.82
MINDY1-207ENST00000622754 NEFLP07196 543 aa20.15■□□□□ 0.82
MINDY1-207ENST00000622754 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
MINDY1-207ENST00000622754 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
MINDY1-207ENST00000622754 DDX10Q13206 875 aaKnown RBP20.09■□□□□ 0.81
MINDY1-207ENST00000622754 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
MINDY1-207ENST00000622754 CFTRP13569 1480 aa20.07■□□□□ 0.8
MINDY1-207ENST00000622754 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
MINDY1-207ENST00000622754 KIF21BO75037 1637 aa20.06■□□□□ 0.8
MINDY1-207ENST00000622754 ERICH6Q7L0X2 663 aa20.03■□□□□ 0.8
MINDY1-207ENST00000622754 PRKCSHP14314 528 aaPredicted RBP20.02■□□□□ 0.8
MINDY1-207ENST00000622754 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
MINDY1-207ENST00000622754 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
MINDY1-207ENST00000622754 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
MINDY1-207ENST00000622754 CUX1P39880 1505 aa19.95■□□□□ 0.78
MINDY1-207ENST00000622754 IRX6P78412 446 aaPredicted RBP19.95■□□□□ 0.78
MINDY1-207ENST00000622754 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
MINDY1-207ENST00000622754 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
MINDY1-207ENST00000622754 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms