RNA–Protein interactions for RNA: ENST00000308418.8

RNASEH2C-201, Transcript of ribonuclease H2 subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNASEH2C, Length 2,794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH2C-201ENST00000308418 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
RNASEH2C-201ENST00000308418 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
RNASEH2C-201ENST00000308418 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
RNASEH2C-201ENST00000308418 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
RNASEH2C-201ENST00000308418 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
RNASEH2C-201ENST00000308418 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
RNASEH2C-201ENST00000308418 ABCC9O60706 1549 aa24.39■■□□□ 1.49
RNASEH2C-201ENST00000308418 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
RNASEH2C-201ENST00000308418 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
RNASEH2C-201ENST00000308418 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
RNASEH2C-201ENST00000308418 HRCP23327 699 aa23.8■■□□□ 1.4
RNASEH2C-201ENST00000308418 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
RNASEH2C-201ENST00000308418 NACADO15069 1562 aa23.7■■□□□ 1.38
RNASEH2C-201ENST00000308418 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
RNASEH2C-201ENST00000308418 PCGF6Q9BYE7 350 aa23.4■■□□□ 1.34
RNASEH2C-201ENST00000308418 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
RNASEH2C-201ENST00000308418 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
RNASEH2C-201ENST00000308418 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
RNASEH2C-201ENST00000308418 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
RNASEH2C-201ENST00000308418 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
RNASEH2C-201ENST00000308418 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
RNASEH2C-201ENST00000308418 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
RNASEH2C-201ENST00000308418 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
RNASEH2C-201ENST00000308418 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
RNASEH2C-201ENST00000308418 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
RNASEH2C-201ENST00000308418 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
RNASEH2C-201ENST00000308418 WIZO95785 1651 aa22.66■■□□□ 1.22
RNASEH2C-201ENST00000308418 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.22
RNASEH2C-201ENST00000308418 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
RNASEH2C-201ENST00000308418 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
RNASEH2C-201ENST00000308418 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
RNASEH2C-201ENST00000308418 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
RNASEH2C-201ENST00000308418 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
RNASEH2C-201ENST00000308418 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
RNASEH2C-201ENST00000308418 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
RNASEH2C-201ENST00000308418 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
RNASEH2C-201ENST00000308418 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
RNASEH2C-201ENST00000308418 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
RNASEH2C-201ENST00000308418 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.14
RNASEH2C-201ENST00000308418 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
RNASEH2C-201ENST00000308418 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
RNASEH2C-201ENST00000308418 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
RNASEH2C-201ENST00000308418 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
RNASEH2C-201ENST00000308418 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
RNASEH2C-201ENST00000308418 SOGA1O94964 1423 aa21.92■■□□□ 1.1
RNASEH2C-201ENST00000308418 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
RNASEH2C-201ENST00000308418 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
RNASEH2C-201ENST00000308418 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
RNASEH2C-201ENST00000308418 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
RNASEH2C-201ENST00000308418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
RNASEH2C-201ENST00000308418 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
RNASEH2C-201ENST00000308418 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
RNASEH2C-201ENST00000308418 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
RNASEH2C-201ENST00000308418 GTF3C3Q9Y5Q9 886 aa21.72■■□□□ 1.07
RNASEH2C-201ENST00000308418 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
RNASEH2C-201ENST00000308418 UBTFP17480 764 aaKnown RBP21.7■■□□□ 1.07
RNASEH2C-201ENST00000308418 TNIKQ9UKE5 1360 aa21.7■■□□□ 1.06
RNASEH2C-201ENST00000308418 MYT1Q01538 1121 aa21.7■■□□□ 1.06
RNASEH2C-201ENST00000308418 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
RNASEH2C-201ENST00000308418 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
RNASEH2C-201ENST00000308418 EEA1Q15075 1411 aa21.66■■□□□ 1.06
RNASEH2C-201ENST00000308418 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
RNASEH2C-201ENST00000308418 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
RNASEH2C-201ENST00000308418 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
RNASEH2C-201ENST00000308418 CFTRP13569 1480 aa21.49■■□□□ 1.03
RNASEH2C-201ENST00000308418 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.03
RNASEH2C-201ENST00000308418 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
RNASEH2C-201ENST00000308418 NESP48681 1621 aa21.44■■□□□ 1.02
RNASEH2C-201ENST00000308418 KIF21BO75037 1637 aa21.44■■□□□ 1.02
RNASEH2C-201ENST00000308418 RANGAP1P46060 587 aaPredicted RBP21.39■■□□□ 1.01
RNASEH2C-201ENST00000308418 CLIP1P30622 1438 aa21.38■■□□□ 1.01
RNASEH2C-201ENST00000308418 RAPGEF2Q9Y4G8 1499 aa21.37■■□□□ 1.01
RNASEH2C-201ENST00000308418 PRDM2Q13029 1718 aa21.31■■□□□ 1
RNASEH2C-201ENST00000308418 TOP2BQ02880 1626 aa21.3■■□□□ 1
RNASEH2C-201ENST00000308418 CUX1P39880 1505 aa21.3■■□□□ 1
RNASEH2C-201ENST00000308418 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
RNASEH2C-201ENST00000308418 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
RNASEH2C-201ENST00000308418 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
RNASEH2C-201ENST00000308418 VPS8Q8N3P4 1428 aa21.27■□□□□ 0.99
RNASEH2C-201ENST00000308418 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
RNASEH2C-201ENST00000308418 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
RNASEH2C-201ENST00000308418 APLP2Q06481 763 aa21.17■□□□□ 0.98
RNASEH2C-201ENST00000308418 LAMC3Q9Y6N6 1575 aa21.16■□□□□ 0.98
RNASEH2C-201ENST00000308418 MIER1Q8N108 512 aa21.12■□□□□ 0.97
RNASEH2C-201ENST00000308418 PRXQ9BXM0 1461 aa21.08■□□□□ 0.97
RNASEH2C-201ENST00000308418 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.96
RNASEH2C-201ENST00000308418 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
RNASEH2C-201ENST00000308418 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
RNASEH2C-201ENST00000308418 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
RNASEH2C-201ENST00000308418 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
RNASEH2C-201ENST00000308418 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
RNASEH2C-201ENST00000308418 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
RNASEH2C-201ENST00000308418 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
RNASEH2C-201ENST00000308418 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
RNASEH2C-201ENST00000308418 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
RNASEH2C-201ENST00000308418 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
RNASEH2C-201ENST00000308418 CUX2O14529 1486 aa20.96■□□□□ 0.95
RNASEH2C-201ENST00000308418 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
RNASEH2C-201ENST00000308418 ARHGAP35Q9NRY4 1499 aa20.85■□□□□ 0.93
RNASEH2C-201ENST00000308418 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms