RNA–Protein interactions for RNA: ENST00000284523.1

WNT3A-201, Transcript of Wnt family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WNT3A, Length 2,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3A-201ENST00000284523 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
WNT3A-201ENST00000284523 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
WNT3A-201ENST00000284523 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
WNT3A-201ENST00000284523 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
WNT3A-201ENST00000284523 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
WNT3A-201ENST00000284523 ZCCHC6Q5VYS8 1495 aaKnown RBP24.91■■□□□ 1.58
WNT3A-201ENST00000284523 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
WNT3A-201ENST00000284523 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
WNT3A-201ENST00000284523 ABCC9O60706 1549 aa24.17■■□□□ 1.46
WNT3A-201ENST00000284523 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
WNT3A-201ENST00000284523 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
WNT3A-201ENST00000284523 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
WNT3A-201ENST00000284523 HRCP23327 699 aa23.93■■□□□ 1.42
WNT3A-201ENST00000284523 PPARGC1BQ86YN6 1023 aaKnown RBP23.9■■□□□ 1.42
WNT3A-201ENST00000284523 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
WNT3A-201ENST00000284523 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
WNT3A-201ENST00000284523 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
WNT3A-201ENST00000284523 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
WNT3A-201ENST00000284523 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
WNT3A-201ENST00000284523 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
WNT3A-201ENST00000284523 NACADO15069 1562 aa23.33■■□□□ 1.33
WNT3A-201ENST00000284523 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
WNT3A-201ENST00000284523 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
WNT3A-201ENST00000284523 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
WNT3A-201ENST00000284523 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
WNT3A-201ENST00000284523 WIZO95785 1651 aa22.94■■□□□ 1.26
WNT3A-201ENST00000284523 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
WNT3A-201ENST00000284523 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
WNT3A-201ENST00000284523 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
WNT3A-201ENST00000284523 ZEB1P37275 1124 aaPredicted RBP22.74■■□□□ 1.23
WNT3A-201ENST00000284523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
WNT3A-201ENST00000284523 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
WNT3A-201ENST00000284523 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
WNT3A-201ENST00000284523 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
WNT3A-201ENST00000284523 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
WNT3A-201ENST00000284523 BICRAQ9NZM4 1560 aa22.52■■□□□ 1.2
WNT3A-201ENST00000284523 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
WNT3A-201ENST00000284523 SOGA1O94964 1423 aa22.45■■□□□ 1.18
WNT3A-201ENST00000284523 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
WNT3A-201ENST00000284523 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
WNT3A-201ENST00000284523 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
WNT3A-201ENST00000284523 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
WNT3A-201ENST00000284523 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
WNT3A-201ENST00000284523 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
WNT3A-201ENST00000284523 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.16
WNT3A-201ENST00000284523 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
WNT3A-201ENST00000284523 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
WNT3A-201ENST00000284523 TNIKQ9UKE5 1360 aa22.17■■□□□ 1.14
WNT3A-201ENST00000284523 MYT1Q01538 1121 aa22.14■■□□□ 1.13
WNT3A-201ENST00000284523 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
WNT3A-201ENST00000284523 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
WNT3A-201ENST00000284523 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
WNT3A-201ENST00000284523 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.13
WNT3A-201ENST00000284523 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
WNT3A-201ENST00000284523 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
WNT3A-201ENST00000284523 GOLGA3Q08378 1498 aa22.01■■□□□ 1.11
WNT3A-201ENST00000284523 EEA1Q15075 1411 aa22■■□□□ 1.11
WNT3A-201ENST00000284523 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
WNT3A-201ENST00000284523 SYNJ1O43426 1573 aa21.94■■□□□ 1.1
WNT3A-201ENST00000284523 YTHDC1Q96MU7 727 aaKnown RBP21.91■■□□□ 1.1
WNT3A-201ENST00000284523 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
WNT3A-201ENST00000284523 APLP2Q06481 763 aa21.89■■□□□ 1.09
WNT3A-201ENST00000284523 CLIP1P30622 1438 aa21.88■■□□□ 1.09
WNT3A-201ENST00000284523 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
WNT3A-201ENST00000284523 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
WNT3A-201ENST00000284523 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
WNT3A-201ENST00000284523 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
WNT3A-201ENST00000284523 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
WNT3A-201ENST00000284523 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.07
WNT3A-201ENST00000284523 KIF21BO75037 1637 aa21.67■■□□□ 1.06
WNT3A-201ENST00000284523 MIER1Q8N108 512 aa21.65■■□□□ 1.06
WNT3A-201ENST00000284523 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
WNT3A-201ENST00000284523 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
WNT3A-201ENST00000284523 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
WNT3A-201ENST00000284523 ITGAEP38570 1179 aa21.58■■□□□ 1.04
WNT3A-201ENST00000284523 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
WNT3A-201ENST00000284523 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
WNT3A-201ENST00000284523 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
WNT3A-201ENST00000284523 ARAP1Q96P48 1450 aa21.43■■□□□ 1.02
WNT3A-201ENST00000284523 PRXQ9BXM0 1461 aa21.43■■□□□ 1.02
WNT3A-201ENST00000284523 CUX1P39880 1505 aa21.43■■□□□ 1.02
WNT3A-201ENST00000284523 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
WNT3A-201ENST00000284523 NESP48681 1621 aa21.37■■□□□ 1.01
WNT3A-201ENST00000284523 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
WNT3A-201ENST00000284523 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
WNT3A-201ENST00000284523 CFTRP13569 1480 aa21.35■■□□□ 1.01
WNT3A-201ENST00000284523 BIVM-ERCC5R4GMW8 1640 aa21.35■■□□□ 1.01
WNT3A-201ENST00000284523 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
WNT3A-201ENST00000284523 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
WNT3A-201ENST00000284523 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
WNT3A-201ENST00000284523 CUX2O14529 1486 aa21.25■□□□□ 0.99
WNT3A-201ENST00000284523 ARHGAP35Q9NRY4 1499 aa21.25■□□□□ 0.99
WNT3A-201ENST00000284523 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
WNT3A-201ENST00000284523 IGF1RP08069 1367 aa21.21■□□□□ 0.99
WNT3A-201ENST00000284523 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
WNT3A-201ENST00000284523 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
WNT3A-201ENST00000284523 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
WNT3A-201ENST00000284523 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.98
WNT3A-201ENST00000284523 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
WNT3A-201ENST00000284523 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms