Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDK8P49336 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 SHMT1P1-201ENST00000419974 1312 ntBASIC16.77■□□□□ 0.28
CDK8P49336 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK8P49336 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK8P49336 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CDK8P49336 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 USP17L6P-201ENST00000382470 1197 ntBASIC16.77■□□□□ 0.28
CDK8P49336 HLA-DMA-203ENST00000395305 777 ntBASIC16.77■□□□□ 0.28
CDK8P49336 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.77■□□□□ 0.28
CDK8P49336 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 RPSAP31-201ENST00000416648 895 ntBASIC16.77■□□□□ 0.28
CDK8P49336 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK8P49336 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK8P49336 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.77■□□□□ 0.28
CDK8P49336 AC095040.1-201ENST00000513286 675 ntBASIC16.77■□□□□ 0.28
CDK8P49336 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 NPM1P43-201ENST00000558669 786 ntBASIC16.77■□□□□ 0.28
CDK8P49336 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK8P49336 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK8P49336 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDK8P49336 NFIC-211ENST00000641145 8399 ntBASIC16.77■□□□□ 0.28
CDK8P49336 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDK8P49336 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK8P49336 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK8P49336 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK8P49336 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK8P49336 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK8P49336 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK8P49336 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDK8P49336 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK8P49336 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CDK8P49336 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 AC006372.4-201ENST00000624122 1543 ntBASIC16.76■□□□□ 0.27
CDK8P49336 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 TUBB8P4-201ENST00000511806 1324 ntBASIC16.76■□□□□ 0.27
CDK8P49336 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 BX679664.3-201ENST00000414070 555 ntBASIC16.76■□□□□ 0.27
CDK8P49336 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 AL512306.1-201ENST00000432698 848 ntBASIC16.76■□□□□ 0.27
CDK8P49336 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK8P49336 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK8P49336 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK8P49336 AC113935.1-201ENST00000471722 555 ntBASIC16.76■□□□□ 0.27
CDK8P49336 CHCHD2P2-201ENST00000503744 321 ntBASIC16.76■□□□□ 0.27
CDK8P49336 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK8P49336 AC087392.5-201ENST00000612517 489 ntBASIC16.76■□□□□ 0.27
CDK8P49336 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK8P49336 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK8P49336 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK8P49336 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDK8P49336 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK8P49336 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK8P49336 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK8P49336 AC063926.3-201ENST00000624734 5658 ntBASIC16.75■□□□□ 0.27
CDK8P49336 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK8P49336 TEKT4P2-202ENST00000559466 1312 ntBASIC16.75■□□□□ 0.27
CDK8P49336 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK8P49336 AC092978.1-202ENST00000637590 1327 ntBASIC16.75■□□□□ 0.27
CDK8P49336 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK8P49336 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK8P49336 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK8P49336 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms