RNA–Protein interactions for RNA: ENST00000369110.7

PREP-201, Transcript of prolyl endopeptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREP, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREP-201ENST00000369110 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
PREP-201ENST00000369110 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
PREP-201ENST00000369110 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
PREP-201ENST00000369110 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
PREP-201ENST00000369110 CCDC180Q9P1Z9 1646 aa26.01■■□□□ 1.75
PREP-201ENST00000369110 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
PREP-201ENST00000369110 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
PREP-201ENST00000369110 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
PREP-201ENST00000369110 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
PREP-201ENST00000369110 SCRIBQ14160 1630 aa24.77■■□□□ 1.56
PREP-201ENST00000369110 ABCC9O60706 1549 aa24.74■■□□□ 1.55
PREP-201ENST00000369110 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
PREP-201ENST00000369110 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
PREP-201ENST00000369110 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
PREP-201ENST00000369110 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
PREP-201ENST00000369110 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
PREP-201ENST00000369110 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
PREP-201ENST00000369110 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
PREP-201ENST00000369110 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
PREP-201ENST00000369110 NACADO15069 1562 aa24.18■■□□□ 1.46
PREP-201ENST00000369110 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
PREP-201ENST00000369110 HRCP23327 699 aa24.03■■□□□ 1.44
PREP-201ENST00000369110 WIZO95785 1651 aa23.94■■□□□ 1.42
PREP-201ENST00000369110 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
PREP-201ENST00000369110 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
PREP-201ENST00000369110 TRIM26Q12899 539 aaPredicted RBP23.69■■□□□ 1.38
PREP-201ENST00000369110 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
PREP-201ENST00000369110 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
PREP-201ENST00000369110 SMARCA4P51532 1647 aa23.47■■□□□ 1.35
PREP-201ENST00000369110 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
PREP-201ENST00000369110 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
PREP-201ENST00000369110 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
PREP-201ENST00000369110 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
PREP-201ENST00000369110 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
PREP-201ENST00000369110 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
PREP-201ENST00000369110 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
PREP-201ENST00000369110 SOGA1O94964 1423 aa23.21■■□□□ 1.31
PREP-201ENST00000369110 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.3
PREP-201ENST00000369110 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
PREP-201ENST00000369110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
PREP-201ENST00000369110 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
PREP-201ENST00000369110 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.27
PREP-201ENST00000369110 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
PREP-201ENST00000369110 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
PREP-201ENST00000369110 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
PREP-201ENST00000369110 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
PREP-201ENST00000369110 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
PREP-201ENST00000369110 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
PREP-201ENST00000369110 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.25
PREP-201ENST00000369110 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
PREP-201ENST00000369110 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
PREP-201ENST00000369110 EEA1Q15075 1411 aa22.74■■□□□ 1.23
PREP-201ENST00000369110 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
PREP-201ENST00000369110 HNRNPUL2Q1KMD3 747 aaKnown RBP22.61■■□□□ 1.21
PREP-201ENST00000369110 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
PREP-201ENST00000369110 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
PREP-201ENST00000369110 CLIP1P30622 1438 aa22.57■■□□□ 1.2
PREP-201ENST00000369110 APLP2Q06481 763 aa22.52■■□□□ 1.2
PREP-201ENST00000369110 KIF21BO75037 1637 aa22.46■■□□□ 1.19
PREP-201ENST00000369110 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
PREP-201ENST00000369110 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
PREP-201ENST00000369110 VPS8Q8N3P4 1428 aa22.37■■□□□ 1.17
PREP-201ENST00000369110 CUX1P39880 1505 aa22.36■■□□□ 1.17
PREP-201ENST00000369110 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
PREP-201ENST00000369110 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
PREP-201ENST00000369110 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
PREP-201ENST00000369110 CFTRP13569 1480 aa22.26■■□□□ 1.15
PREP-201ENST00000369110 KANK4Q5T7N3 995 aaPredicted RBP22.24■■□□□ 1.15
PREP-201ENST00000369110 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
PREP-201ENST00000369110 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
PREP-201ENST00000369110 ITGAEP38570 1179 aa22.18■■□□□ 1.14
PREP-201ENST00000369110 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
PREP-201ENST00000369110 CUX2O14529 1486 aa22.15■■□□□ 1.14
PREP-201ENST00000369110 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
PREP-201ENST00000369110 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
PREP-201ENST00000369110 P3H3Q8IVL6 736 aa22.12■■□□□ 1.13
PREP-201ENST00000369110 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
PREP-201ENST00000369110 ATP1B4Q9UN42 357 aaPredicted RBP22.1■■□□□ 1.13
PREP-201ENST00000369110 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
PREP-201ENST00000369110 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
PREP-201ENST00000369110 IGF1RP08069 1367 aa22.04■■□□□ 1.12
PREP-201ENST00000369110 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
PREP-201ENST00000369110 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
PREP-201ENST00000369110 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
PREP-201ENST00000369110 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
PREP-201ENST00000369110 NESP48681 1621 aa21.98■■□□□ 1.11
PREP-201ENST00000369110 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
PREP-201ENST00000369110 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
PREP-201ENST00000369110 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
PREP-201ENST00000369110 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
PREP-201ENST00000369110 ACIN1Q9UKV3 1341 aaKnown RBP21.93■■□□□ 1.1
PREP-201ENST00000369110 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
PREP-201ENST00000369110 MIER1Q8N108 512 aa21.87■■□□□ 1.09
PREP-201ENST00000369110 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
PREP-201ENST00000369110 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.09
PREP-201ENST00000369110 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
PREP-201ENST00000369110 CENPBP07199 599 aaPredicted RBP21.82■■□□□ 1.08
PREP-201ENST00000369110 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
PREP-201ENST00000369110 PELP1Q8IZL8 1130 aaKnown RBP21.79■■□□□ 1.08
PREP-201ENST00000369110 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms