RNA–Protein interactions for RNA: ENST00000397359.7

CDH24-202, Transcript of cadherin 24, humanhuman

TSL 5 BASIC

Gene CDH24, Length 3,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-202ENST00000397359 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
CDH24-202ENST00000397359 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
CDH24-202ENST00000397359 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
CDH24-202ENST00000397359 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
CDH24-202ENST00000397359 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
CDH24-202ENST00000397359 PPARGC1BQ86YN6 1023 aaKnown RBP25.23■■□□□ 1.63
CDH24-202ENST00000397359 ABCC9O60706 1549 aa25.22■■□□□ 1.63
CDH24-202ENST00000397359 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.63
CDH24-202ENST00000397359 HRCP23327 699 aa25.13■■□□□ 1.61
CDH24-202ENST00000397359 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
CDH24-202ENST00000397359 LOC105371045A0A1W2PR82 267 aa25.01■■□□□ 1.59
CDH24-202ENST00000397359 EHMT2Q96KQ7 1210 aa24.97■■□□□ 1.59
CDH24-202ENST00000397359 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
CDH24-202ENST00000397359 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
CDH24-202ENST00000397359 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
CDH24-202ENST00000397359 PELP1Q8IZL8 1130 aaKnown RBP24.59■■□□□ 1.53
CDH24-202ENST00000397359 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
CDH24-202ENST00000397359 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
CDH24-202ENST00000397359 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
CDH24-202ENST00000397359 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
CDH24-202ENST00000397359 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.44
CDH24-202ENST00000397359 DCAF1Q9Y4B6 1507 aa23.98■■□□□ 1.43
CDH24-202ENST00000397359 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
CDH24-202ENST00000397359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
CDH24-202ENST00000397359 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
CDH24-202ENST00000397359 NACADO15069 1562 aa23.71■■□□□ 1.39
CDH24-202ENST00000397359 CCER1Q8TC90 406 aaPredicted RBP23.7■■□□□ 1.38
CDH24-202ENST00000397359 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
CDH24-202ENST00000397359 MYT1Q01538 1121 aa23.6■■□□□ 1.37
CDH24-202ENST00000397359 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
CDH24-202ENST00000397359 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
CDH24-202ENST00000397359 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
CDH24-202ENST00000397359 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
CDH24-202ENST00000397359 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
CDH24-202ENST00000397359 ACIN1Q9UKV3 1341 aaKnown RBP23.32■■□□□ 1.32
CDH24-202ENST00000397359 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
CDH24-202ENST00000397359 DIEXFQ68CQ4 756 aaKnown RBP23.26■■□□□ 1.31
CDH24-202ENST00000397359 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
CDH24-202ENST00000397359 HNRNPUL2Q1KMD3 747 aaKnown RBP23.12■■□□□ 1.29
CDH24-202ENST00000397359 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
CDH24-202ENST00000397359 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
CDH24-202ENST00000397359 WIZO95785 1651 aa22.88■■□□□ 1.25
CDH24-202ENST00000397359 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
CDH24-202ENST00000397359 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
CDH24-202ENST00000397359 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
CDH24-202ENST00000397359 APLP2Q06481 763 aa22.79■■□□□ 1.24
CDH24-202ENST00000397359 BCL11AQ9H165 835 aa22.79■■□□□ 1.24
CDH24-202ENST00000397359 ZNF316A6NFI3 1004 aaPredicted RBP22.78■■□□□ 1.24
CDH24-202ENST00000397359 SOGA1O94964 1423 aa22.77■■□□□ 1.24
CDH24-202ENST00000397359 CSRNP3Q8WYN3 585 aa22.76■■□□□ 1.23
CDH24-202ENST00000397359 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
CDH24-202ENST00000397359 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
CDH24-202ENST00000397359 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
CDH24-202ENST00000397359 MIER1Q8N108 512 aa22.73■■□□□ 1.23
CDH24-202ENST00000397359 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
CDH24-202ENST00000397359 ITGAEP38570 1179 aa22.61■■□□□ 1.21
CDH24-202ENST00000397359 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
CDH24-202ENST00000397359 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
CDH24-202ENST00000397359 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
CDH24-202ENST00000397359 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
CDH24-202ENST00000397359 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
CDH24-202ENST00000397359 CLIP1P30622 1438 aa22.29■■□□□ 1.16
CDH24-202ENST00000397359 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.165e-6■■■■■ 29.2
CDH24-202ENST00000397359 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
CDH24-202ENST00000397359 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
CDH24-202ENST00000397359 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
CDH24-202ENST00000397359 BCANQ96GW7 911 aa22.26■■□□□ 1.15
CDH24-202ENST00000397359 ANP32EQ9BTT0 268 aa22.25■■□□□ 1.15
CDH24-202ENST00000397359 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
CDH24-202ENST00000397359 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
CDH24-202ENST00000397359 PRKCSHP14314 528 aaPredicted RBP22.18■■□□□ 1.14
CDH24-202ENST00000397359 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
CDH24-202ENST00000397359 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
CDH24-202ENST00000397359 HIRIP3Q9BW71 556 aaPredicted RBP22.1■■□□□ 1.13
CDH24-202ENST00000397359 EEA1Q15075 1411 aa22.09■■□□□ 1.13
CDH24-202ENST00000397359 KCNH8Q96L42 1107 aa22.08■■□□□ 1.12
CDH24-202ENST00000397359 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
CDH24-202ENST00000397359 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
CDH24-202ENST00000397359 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
CDH24-202ENST00000397359 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
CDH24-202ENST00000397359 TSHZ2Q9NRE2 1034 aa22.01■■□□□ 1.11
CDH24-202ENST00000397359 SUPT16HQ9Y5B9 1047 aaKnown RBP22■■□□□ 1.11
CDH24-202ENST00000397359 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
CDH24-202ENST00000397359 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
CDH24-202ENST00000397359 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
CDH24-202ENST00000397359 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
CDH24-202ENST00000397359 SIN3AQ96ST3 1273 aa21.87■■□□□ 1.09
CDH24-202ENST00000397359 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
CDH24-202ENST00000397359 FKBP8Q14318 412 aa21.85■■□□□ 1.09
CDH24-202ENST00000397359 TRIM52Q96A61 297 aa21.85■■□□□ 1.09
CDH24-202ENST00000397359 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
CDH24-202ENST00000397359 NESP48681 1621 aa21.79■■□□□ 1.08
CDH24-202ENST00000397359 KIF21BO75037 1637 aa21.77■■□□□ 1.07
CDH24-202ENST00000397359 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
CDH24-202ENST00000397359 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
CDH24-202ENST00000397359 NEFLP07196 543 aa21.72■■□□□ 1.07
CDH24-202ENST00000397359 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
CDH24-202ENST00000397359 IRX6P78412 446 aaPredicted RBP21.66■■□□□ 1.06
CDH24-202ENST00000397359 CCNB3Q8WWL7 1395 aa21.66■■□□□ 1.06
CDH24-202ENST00000397359 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms