RNA–Protein interactions for RNA: ENST00000326575.9

KDSR-201, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

TSL 2 BASIC

Gene KDSR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-201ENST00000326575 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
KDSR-201ENST00000326575 ABCC9O60706 1549 aa31.8■■■□□ 2.68
KDSR-201ENST00000326575 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
KDSR-201ENST00000326575 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.42
KDSR-201ENST00000326575 NACADO15069 1562 aa29.94■■■□□ 2.38
KDSR-201ENST00000326575 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
KDSR-201ENST00000326575 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
KDSR-201ENST00000326575 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
KDSR-201ENST00000326575 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.32
KDSR-201ENST00000326575 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.3
KDSR-201ENST00000326575 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
KDSR-201ENST00000326575 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
KDSR-201ENST00000326575 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
KDSR-201ENST00000326575 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
KDSR-201ENST00000326575 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
KDSR-201ENST00000326575 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
KDSR-201ENST00000326575 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
KDSR-201ENST00000326575 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
KDSR-201ENST00000326575 NCAPD3P42695 1498 aa27.62■■■□□ 2.01
KDSR-201ENST00000326575 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
KDSR-201ENST00000326575 ATAD2BQ9ULI0 1458 aa27.51■■■□□ 2
KDSR-201ENST00000326575 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
KDSR-201ENST00000326575 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
KDSR-201ENST00000326575 CUX2O14529 1486 aa27.46■■□□□ 1.99
KDSR-201ENST00000326575 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
KDSR-201ENST00000326575 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
KDSR-201ENST00000326575 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
KDSR-201ENST00000326575 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
KDSR-201ENST00000326575 NESP48681 1621 aa27.27■■□□□ 1.96
KDSR-201ENST00000326575 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
KDSR-201ENST00000326575 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
KDSR-201ENST00000326575 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
KDSR-201ENST00000326575 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
KDSR-201ENST00000326575 THOC2Q8NI27 1593 aaKnown RBP27.04■■□□□ 1.92
KDSR-201ENST00000326575 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
KDSR-201ENST00000326575 PDS5BQ9NTI5 1447 aa26.89■■□□□ 1.89
KDSR-201ENST00000326575 WIZO95785 1651 aa26.79■■□□□ 1.88
KDSR-201ENST00000326575 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
KDSR-201ENST00000326575 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
KDSR-201ENST00000326575 WDR62O43379 1518 aa26.62■■□□□ 1.85
KDSR-201ENST00000326575 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
KDSR-201ENST00000326575 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
KDSR-201ENST00000326575 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
KDSR-201ENST00000326575 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
KDSR-201ENST00000326575 CFTRP13569 1480 aa26.44■■□□□ 1.82
KDSR-201ENST00000326575 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
KDSR-201ENST00000326575 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
KDSR-201ENST00000326575 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
KDSR-201ENST00000326575 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
KDSR-201ENST00000326575 OSCARQ8IYS5 282 aa26.16■■□□□ 1.78
KDSR-201ENST00000326575 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
KDSR-201ENST00000326575 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
KDSR-201ENST00000326575 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
KDSR-201ENST00000326575 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
KDSR-201ENST00000326575 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
KDSR-201ENST00000326575 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
KDSR-201ENST00000326575 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
KDSR-201ENST00000326575 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
KDSR-201ENST00000326575 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
KDSR-201ENST00000326575 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
KDSR-201ENST00000326575 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
KDSR-201ENST00000326575 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
KDSR-201ENST00000326575 CHD1O14646 1710 aa25.73■■□□□ 1.71
KDSR-201ENST00000326575 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
KDSR-201ENST00000326575 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
KDSR-201ENST00000326575 FBLN2P98095 1184 aa25.61■■□□□ 1.69
KDSR-201ENST00000326575 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
KDSR-201ENST00000326575 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
KDSR-201ENST00000326575 SOGA1O94964 1423 aa25.56■■□□□ 1.68
KDSR-201ENST00000326575 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
KDSR-201ENST00000326575 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
KDSR-201ENST00000326575 ARAP1Q96P48 1450 aa25.51■■□□□ 1.67
KDSR-201ENST00000326575 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
KDSR-201ENST00000326575 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
KDSR-201ENST00000326575 CUX1P39880 1505 aa25.47■■□□□ 1.67
KDSR-201ENST00000326575 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
KDSR-201ENST00000326575 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
KDSR-201ENST00000326575 CHMP7Q8WUX9 453 aaPredicted RBP25.38■■□□□ 1.65
KDSR-201ENST00000326575 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
KDSR-201ENST00000326575 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
KDSR-201ENST00000326575 TRHP20396 242 aaPredicted RBP25.37■■□□□ 1.65
KDSR-201ENST00000326575 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
KDSR-201ENST00000326575 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
KDSR-201ENST00000326575 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
KDSR-201ENST00000326575 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
KDSR-201ENST00000326575 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
KDSR-201ENST00000326575 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
KDSR-201ENST00000326575 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
KDSR-201ENST00000326575 GRIN2AQ12879 1464 aa25.05■■□□□ 1.6
KDSR-201ENST00000326575 ADAMTS12P58397 1594 aa25.04■■□□□ 1.6
KDSR-201ENST00000326575 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
KDSR-201ENST00000326575 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
KDSR-201ENST00000326575 ERCC6L2Q5T890 1561 aa24.99■■□□□ 1.59
KDSR-201ENST00000326575 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
KDSR-201ENST00000326575 NUP160Q12769 1436 aa24.95■■□□□ 1.59
KDSR-201ENST00000326575 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
KDSR-201ENST00000326575 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
KDSR-201ENST00000326575 SHROOM2Q13796 1616 aa24.89■■□□□ 1.57
KDSR-201ENST00000326575 PRG4Q92954 1404 aaPredicted RBP24.74■■□□□ 1.55
KDSR-201ENST00000326575 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms