RNA–Protein interactions for RNA: ENST00000637263.1

EFHC1-230, Transcript of EF-hand domain containing 1, humanhuman

TSL 5 BASIC

Gene EFHC1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-230ENST00000637263 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
EFHC1-230ENST00000637263 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
EFHC1-230ENST00000637263 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
EFHC1-230ENST00000637263 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
EFHC1-230ENST00000637263 ABCC9O60706 1549 aa26.93■■□□□ 1.9
EFHC1-230ENST00000637263 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.89
EFHC1-230ENST00000637263 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
EFHC1-230ENST00000637263 NACADO15069 1562 aa26.6■■□□□ 1.85
EFHC1-230ENST00000637263 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
EFHC1-230ENST00000637263 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
EFHC1-230ENST00000637263 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
EFHC1-230ENST00000637263 UNC13AQ9UPW8 1703 aa25.86■■□□□ 1.73
EFHC1-230ENST00000637263 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
EFHC1-230ENST00000637263 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
EFHC1-230ENST00000637263 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
EFHC1-230ENST00000637263 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
EFHC1-230ENST00000637263 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
EFHC1-230ENST00000637263 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
EFHC1-230ENST00000637263 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
EFHC1-230ENST00000637263 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
EFHC1-230ENST00000637263 WIZO95785 1651 aa25.02■■□□□ 1.6
EFHC1-230ENST00000637263 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
EFHC1-230ENST00000637263 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
EFHC1-230ENST00000637263 TOP2AP11388 1531 aaKnown RBP24.78■■□□□ 1.56
EFHC1-230ENST00000637263 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
EFHC1-230ENST00000637263 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
EFHC1-230ENST00000637263 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
EFHC1-230ENST00000637263 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
EFHC1-230ENST00000637263 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
EFHC1-230ENST00000637263 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
EFHC1-230ENST00000637263 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
EFHC1-230ENST00000637263 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
EFHC1-230ENST00000637263 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
EFHC1-230ENST00000637263 CFTRP13569 1480 aa23.97■■□□□ 1.43
EFHC1-230ENST00000637263 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
EFHC1-230ENST00000637263 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
EFHC1-230ENST00000637263 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
EFHC1-230ENST00000637263 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.41
EFHC1-230ENST00000637263 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
EFHC1-230ENST00000637263 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
EFHC1-230ENST00000637263 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
EFHC1-230ENST00000637263 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
EFHC1-230ENST00000637263 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
EFHC1-230ENST00000637263 NESP48681 1621 aa23.63■■□□□ 1.37
EFHC1-230ENST00000637263 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
EFHC1-230ENST00000637263 CUX1P39880 1505 aa23.58■■□□□ 1.37
EFHC1-230ENST00000637263 EEA1Q15075 1411 aa23.52■■□□□ 1.36
EFHC1-230ENST00000637263 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.35
EFHC1-230ENST00000637263 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
EFHC1-230ENST00000637263 SOGA1O94964 1423 aa23.48■■□□□ 1.35
EFHC1-230ENST00000637263 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
EFHC1-230ENST00000637263 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
EFHC1-230ENST00000637263 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
EFHC1-230ENST00000637263 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
EFHC1-230ENST00000637263 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
EFHC1-230ENST00000637263 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
EFHC1-230ENST00000637263 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
EFHC1-230ENST00000637263 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.32
EFHC1-230ENST00000637263 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
EFHC1-230ENST00000637263 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
EFHC1-230ENST00000637263 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
EFHC1-230ENST00000637263 KIF21BO75037 1637 aa23.2■■□□□ 1.31
EFHC1-230ENST00000637263 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
EFHC1-230ENST00000637263 CUX2O14529 1486 aa23.16■■□□□ 1.3
EFHC1-230ENST00000637263 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
EFHC1-230ENST00000637263 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
EFHC1-230ENST00000637263 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
EFHC1-230ENST00000637263 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
EFHC1-230ENST00000637263 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
EFHC1-230ENST00000637263 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
EFHC1-230ENST00000637263 WDR62O43379 1518 aa23.1■■□□□ 1.29
EFHC1-230ENST00000637263 PRXQ9BXM0 1461 aa23.08■■□□□ 1.28
EFHC1-230ENST00000637263 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
EFHC1-230ENST00000637263 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
EFHC1-230ENST00000637263 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
EFHC1-230ENST00000637263 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
EFHC1-230ENST00000637263 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
EFHC1-230ENST00000637263 IGF1RP08069 1367 aa23.02■■□□□ 1.28
EFHC1-230ENST00000637263 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
EFHC1-230ENST00000637263 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
EFHC1-230ENST00000637263 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
EFHC1-230ENST00000637263 CEP162Q5TB80 1403 aa22.92■■□□□ 1.26
EFHC1-230ENST00000637263 CUL7Q14999 1698 aa22.91■■□□□ 1.26
EFHC1-230ENST00000637263 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
EFHC1-230ENST00000637263 CARMIL1Q5VZK9 1371 aa22.9■■□□□ 1.26
EFHC1-230ENST00000637263 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
EFHC1-230ENST00000637263 PBRM1Q86U86 1689 aa22.82■■□□□ 1.24
EFHC1-230ENST00000637263 CLIP1P30622 1438 aa22.77■■□□□ 1.24
EFHC1-230ENST00000637263 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.23
EFHC1-230ENST00000637263 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
EFHC1-230ENST00000637263 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
EFHC1-230ENST00000637263 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
EFHC1-230ENST00000637263 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
EFHC1-230ENST00000637263 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
EFHC1-230ENST00000637263 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
EFHC1-230ENST00000637263 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
EFHC1-230ENST00000637263 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
EFHC1-230ENST00000637263 SNAPC4Q5SXM2 1469 aa22.57■■□□□ 1.2
EFHC1-230ENST00000637263 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
EFHC1-230ENST00000637263 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms