RNA–Protein interactions for RNA: ENST00000626459.2

REPS1-221, Transcript of RALBP1 associated Eps domain containing 1, humanhuman

TSL 5 BASIC

Gene REPS1, Length 3,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS1-221ENST00000626459 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
REPS1-221ENST00000626459 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
REPS1-221ENST00000626459 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
REPS1-221ENST00000626459 ABCC9O60706 1549 aa26.48■■□□□ 1.83
REPS1-221ENST00000626459 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
REPS1-221ENST00000626459 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
REPS1-221ENST00000626459 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
REPS1-221ENST00000626459 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
REPS1-221ENST00000626459 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
REPS1-221ENST00000626459 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
REPS1-221ENST00000626459 NACADO15069 1562 aa24.87■■□□□ 1.57
REPS1-221ENST00000626459 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
REPS1-221ENST00000626459 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
REPS1-221ENST00000626459 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
REPS1-221ENST00000626459 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
REPS1-221ENST00000626459 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
REPS1-221ENST00000626459 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
REPS1-221ENST00000626459 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
REPS1-221ENST00000626459 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
REPS1-221ENST00000626459 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
REPS1-221ENST00000626459 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
REPS1-221ENST00000626459 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
REPS1-221ENST00000626459 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
REPS1-221ENST00000626459 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
REPS1-221ENST00000626459 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
REPS1-221ENST00000626459 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
REPS1-221ENST00000626459 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
REPS1-221ENST00000626459 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
REPS1-221ENST00000626459 HRCP23327 699 aa23.51■■□□□ 1.35
REPS1-221ENST00000626459 WIZO95785 1651 aa23.49■■□□□ 1.35
REPS1-221ENST00000626459 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
REPS1-221ENST00000626459 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
REPS1-221ENST00000626459 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
REPS1-221ENST00000626459 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
REPS1-221ENST00000626459 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
REPS1-221ENST00000626459 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
REPS1-221ENST00000626459 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
REPS1-221ENST00000626459 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
REPS1-221ENST00000626459 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
REPS1-221ENST00000626459 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
REPS1-221ENST00000626459 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
REPS1-221ENST00000626459 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
REPS1-221ENST00000626459 FBLN2P98095 1184 aa23.03■■□□□ 1.28
REPS1-221ENST00000626459 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
REPS1-221ENST00000626459 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
REPS1-221ENST00000626459 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
REPS1-221ENST00000626459 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
REPS1-221ENST00000626459 NESP48681 1621 aa22.84■■□□□ 1.25
REPS1-221ENST00000626459 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
REPS1-221ENST00000626459 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
REPS1-221ENST00000626459 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
REPS1-221ENST00000626459 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
REPS1-221ENST00000626459 APLP2Q06481 763 aa22.78■■□□□ 1.24
REPS1-221ENST00000626459 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
REPS1-221ENST00000626459 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
REPS1-221ENST00000626459 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
REPS1-221ENST00000626459 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
REPS1-221ENST00000626459 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
REPS1-221ENST00000626459 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
REPS1-221ENST00000626459 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
REPS1-221ENST00000626459 CFTRP13569 1480 aa22.56■■□□□ 1.2
REPS1-221ENST00000626459 SOGA1O94964 1423 aa22.54■■□□□ 1.2
REPS1-221ENST00000626459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
REPS1-221ENST00000626459 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
REPS1-221ENST00000626459 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
REPS1-221ENST00000626459 CUX2O14529 1486 aa22.48■■□□□ 1.19
REPS1-221ENST00000626459 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
REPS1-221ENST00000626459 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
REPS1-221ENST00000626459 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
REPS1-221ENST00000626459 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
REPS1-221ENST00000626459 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
REPS1-221ENST00000626459 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
REPS1-221ENST00000626459 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
REPS1-221ENST00000626459 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
REPS1-221ENST00000626459 EEA1Q15075 1411 aa22.2■■□□□ 1.14
REPS1-221ENST00000626459 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
REPS1-221ENST00000626459 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.14
REPS1-221ENST00000626459 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
REPS1-221ENST00000626459 CUX1P39880 1505 aa22.18■■□□□ 1.14
REPS1-221ENST00000626459 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
REPS1-221ENST00000626459 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
REPS1-221ENST00000626459 ITGAEP38570 1179 aa22.13■■□□□ 1.13
REPS1-221ENST00000626459 POLA1P09884 1462 aaPredicted RBP22.11■■□□□ 1.13
REPS1-221ENST00000626459 GOLGA3Q08378 1498 aa22.1■■□□□ 1.13
REPS1-221ENST00000626459 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
REPS1-221ENST00000626459 IGF1RP08069 1367 aa22.04■■□□□ 1.12
REPS1-221ENST00000626459 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
REPS1-221ENST00000626459 CLIP1P30622 1438 aa22.01■■□□□ 1.11
REPS1-221ENST00000626459 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
REPS1-221ENST00000626459 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
REPS1-221ENST00000626459 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
REPS1-221ENST00000626459 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
REPS1-221ENST00000626459 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
REPS1-221ENST00000626459 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
REPS1-221ENST00000626459 KIF21AQ7Z4S6 1674 aa21.89■■□□□ 1.1
REPS1-221ENST00000626459 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
REPS1-221ENST00000626459 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
REPS1-221ENST00000626459 FAM50AQ14320 339 aaKnown RBP21.86■■□□□ 1.09
REPS1-221ENST00000626459 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
REPS1-221ENST00000626459 NPM1P06748 294 aaKnown RBP eCLIP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms