RNA–Protein interactions for RNA: ENST00000558669.2

NPM1P43-201, Transcript of nucleophosmin 1 pseudogene 43, humanhuman

BASIC

Gene NPM1P43, Length 786 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P43-201ENST00000558669 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
NPM1P43-201ENST00000558669 ABCC9O60706 1549 aa31.95■■■□□ 2.71
NPM1P43-201ENST00000558669 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
NPM1P43-201ENST00000558669 AEBP2Q6ZN18 517 aaPredicted RBP30.82■■■□□ 2.52
NPM1P43-201ENST00000558669 RB1CC1Q8TDY2 1594 aa30.38■■■□□ 2.45
NPM1P43-201ENST00000558669 NACADO15069 1562 aa30.15■■■□□ 2.42
NPM1P43-201ENST00000558669 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
NPM1P43-201ENST00000558669 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
NPM1P43-201ENST00000558669 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
NPM1P43-201ENST00000558669 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
NPM1P43-201ENST00000558669 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
NPM1P43-201ENST00000558669 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
NPM1P43-201ENST00000558669 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
NPM1P43-201ENST00000558669 DCAF1Q9Y4B6 1507 aa29.29■■■□□ 2.28
NPM1P43-201ENST00000558669 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
NPM1P43-201ENST00000558669 CHIC1Q5VXU3 224 aa29.05■■■□□ 2.24
NPM1P43-201ENST00000558669 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
NPM1P43-201ENST00000558669 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
NPM1P43-201ENST00000558669 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
NPM1P43-201ENST00000558669 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
NPM1P43-201ENST00000558669 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
NPM1P43-201ENST00000558669 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
NPM1P43-201ENST00000558669 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
NPM1P43-201ENST00000558669 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
NPM1P43-201ENST00000558669 CUX2O14529 1486 aa27.65■■■□□ 2.02
NPM1P43-201ENST00000558669 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
NPM1P43-201ENST00000558669 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
NPM1P43-201ENST00000558669 ERCC6Q03468 1493 aa27.57■■■□□ 2
NPM1P43-201ENST00000558669 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
NPM1P43-201ENST00000558669 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
NPM1P43-201ENST00000558669 NESP48681 1621 aa27.43■■□□□ 1.98
NPM1P43-201ENST00000558669 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
NPM1P43-201ENST00000558669 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
NPM1P43-201ENST00000558669 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
NPM1P43-201ENST00000558669 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
NPM1P43-201ENST00000558669 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
NPM1P43-201ENST00000558669 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
NPM1P43-201ENST00000558669 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
NPM1P43-201ENST00000558669 WIZO95785 1651 aa26.94■■□□□ 1.9
NPM1P43-201ENST00000558669 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
NPM1P43-201ENST00000558669 WDR62O43379 1518 aa26.83■■□□□ 1.89
NPM1P43-201ENST00000558669 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
NPM1P43-201ENST00000558669 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
NPM1P43-201ENST00000558669 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
NPM1P43-201ENST00000558669 CFTRP13569 1480 aa26.64■■□□□ 1.86
NPM1P43-201ENST00000558669 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
NPM1P43-201ENST00000558669 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
NPM1P43-201ENST00000558669 URB2Q14146 1524 aaKnown RBP26.48■■□□□ 1.83
NPM1P43-201ENST00000558669 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
NPM1P43-201ENST00000558669 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
NPM1P43-201ENST00000558669 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
NPM1P43-201ENST00000558669 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
NPM1P43-201ENST00000558669 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
NPM1P43-201ENST00000558669 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
NPM1P43-201ENST00000558669 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
NPM1P43-201ENST00000558669 PHF23Q9BUL5 403 aaPredicted RBP26.06■■□□□ 1.76
NPM1P43-201ENST00000558669 ABCC8Q09428 1581 aa26.05■■□□□ 1.76
NPM1P43-201ENST00000558669 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
NPM1P43-201ENST00000558669 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
NPM1P43-201ENST00000558669 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
NPM1P43-201ENST00000558669 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
NPM1P43-201ENST00000558669 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
NPM1P43-201ENST00000558669 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
NPM1P43-201ENST00000558669 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
NPM1P43-201ENST00000558669 POLA1P09884 1462 aaPredicted RBP25.87■■□□□ 1.73
NPM1P43-201ENST00000558669 CHD1O14646 1710 aa25.85■■□□□ 1.73
NPM1P43-201ENST00000558669 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
NPM1P43-201ENST00000558669 RAD54L2Q9Y4B4 1467 aa25.75■■□□□ 1.71
NPM1P43-201ENST00000558669 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
NPM1P43-201ENST00000558669 SOGA1O94964 1423 aa25.69■■□□□ 1.7
NPM1P43-201ENST00000558669 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
NPM1P43-201ENST00000558669 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
NPM1P43-201ENST00000558669 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
NPM1P43-201ENST00000558669 CUX1P39880 1505 aa25.65■■□□□ 1.7
NPM1P43-201ENST00000558669 CYB5RLQ6IPT4 315 aa25.63■■□□□ 1.69
NPM1P43-201ENST00000558669 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
NPM1P43-201ENST00000558669 FBLN2P98095 1184 aa25.61■■□□□ 1.69
NPM1P43-201ENST00000558669 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
NPM1P43-201ENST00000558669 MAGI1Q96QZ7 1491 aaPredicted RBP25.56■■□□□ 1.68
NPM1P43-201ENST00000558669 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
NPM1P43-201ENST00000558669 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
NPM1P43-201ENST00000558669 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
NPM1P43-201ENST00000558669 PBRM1Q86U86 1689 aa25.45■■□□□ 1.66
NPM1P43-201ENST00000558669 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
NPM1P43-201ENST00000558669 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
NPM1P43-201ENST00000558669 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
NPM1P43-201ENST00000558669 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
NPM1P43-201ENST00000558669 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
NPM1P43-201ENST00000558669 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
NPM1P43-201ENST00000558669 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
NPM1P43-201ENST00000558669 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
NPM1P43-201ENST00000558669 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.63
NPM1P43-201ENST00000558669 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
NPM1P43-201ENST00000558669 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
NPM1P43-201ENST00000558669 NUP160Q12769 1436 aa25.16■■□□□ 1.62
NPM1P43-201ENST00000558669 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
NPM1P43-201ENST00000558669 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
NPM1P43-201ENST00000558669 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
NPM1P43-201ENST00000558669 FHAD1B1AJZ9 1412 aa25.08■■□□□ 1.61
NPM1P43-201ENST00000558669 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms